Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0560 ATGCATCGAAATAGTTGCGCATTTGGTTCATCATCAGGATCAGCTCATATACCCCCAAATCGATTGAATGCTATGCAAATCAATCAAATGGGTTCTTCTTCTGAGAACCATAAACCCTATGGTATTCCACCCTCTCACCCTAATACCAATATCTCACCTTCTTCAACTTATCCTCAATTTTTTAATTCTGGTTCCCCCAATTTGAGCTCTGCATCATCATCCCATTCCAGGTCTTTGTCTCAACCCTCATTTTTCTCTCTGGATTCCTTGCCCCCATTGAGTCCTTCCCCTTATAAAGAACCCTTTTCAGACTCAATTTCAATTGATGTGTCTGTGGAGGAGAATTTGGCTACCTCTCATGCCCCTTCCCCTAACCGCGGTCACGCGGTTCAGCTTGGCCATTCTCTTCCTCCTCGAAAAGGACATAGGCGTTCTAGCAGTGATTCCCCTTTAGGAATTTCTGAATTTATTCAGTCTATCCCTCAGCTGGTTCCGTCTAGGAATTGGAGTGAGCGTGGCAATTCGGCTTCTAGAGCAGAGAACTCAGGTTTTGAGAAGCCAATTCAGTTAGTGTTAAAGGAGCCAAACAAAGATATGCACTGTGTTGATGGGAAGAAAGAGGATGATGATCTGGATGATTTATTTAGTGCATATATGAATTTGGACAATATTCATAGTCTGAATTTTTCTGGTATGGAAGATAAGGATTTGGATAGCAGAACAAGTGGTTCCAAGACTGTTGAAAGCAGTGACAACGAAGTTGAGAGTCATGCGAATGGAAAAGCAACCGGTGCTCAAGGTGCAAGTTCAAGCTGTTCAGATGAGAGGAGGGAAGGAGTGAAGAGGAGTTCTAATGGAGACATTGCACCTAGTGCTCGGCACCGGAGAAGTTTCTCATTGGACAGCTCCATGGGAAATTTTCATATTGGAGATGAATCACCTAAGCTTCCTCCCTTGCAAAACAGAGTTGGTCAACACTCGCCTAGCAATTCGATAGATGGTAAAACATCTGAAATCAGCATGGAGTTTGGAAATGGTGAATTCAGCTCTGAGGAGATAAAGAAAATAATGGATAATGATAAACTTGCTGAAATTGCCATGTCTGATCCCAAACGAGCAAAAAGGATTTTGGCTAATCGTCTATCTGCTGCTCGCTCAAAGGAGCGGAAGATGCGGTATATTACTGAATTGGAGCACAAGGTCCAAACTCTTCAGACAGAGACAATTGCATTGTCTACTCAATTTACCAAGTTACAGATGGATAATTCAGAGCTTAGAACTGAGAATAATGAATACAAATTGAGTATTCAAGCCTTGGAACAACAATCCCAACTGAAAGATGCTCTGAATGAGACCCTGGATGCTGAAGTGCGGCGTCTGAGACGCACCGTTGCAGAACTTGGCGGAGAGTCCCTCCATTCAAGTCGCATGGCACAGCAGCTTGCCATTAACCAGCAAATGTTCCTGTTACAGCAGCGGCAGCAGCAGCGCCCCAGCCAACTTAGACATTCTCAGGAACAGACACAGACTCAGTCACAGCGCCACAATGGCAAAGCTACAGTCTATTGA 1569 0.4398 MHRNSCAFGSSSGSAHIPPNRLNAMQINQMGSSSENHKPYGIPPSHPNTNISPSSTYPQFFNSGSPNLSSASSSHSRSLSQPSFFSLDSLPPLSPSPYKEPFSDSISIDVSVEENLATSHAPSPNRGHAVQLGHSLPPRKGHRRSSSDSPLGISEFIQSIPQLVPSRNWSERGNSASRAENSGFEKPIQLVLKEPNKDMHCVDGKKEDDDLDDLFSAYMNLDNIHSLNFSGMEDKDLDSRTSGSKTVESSDNEVESHANGKATGAQGASSSCSDERREGVKRSSNGDIAPSARHRRSFSLDSSMGNFHIGDESPKLPPLQNRVGQHSPSNSIDGKTSEISMEFGNGEFSSEEIKKIMDNDKLAEIAMSDPKRAKRILANRLSAARSKERKMRYITELEHKVQTLQTETIALSTQFTKLQMDNSELRTENNEYKLSIQALEQQSQLKDALNETLDAEVRRLRRTVAELGGESLHSSRMAQQLAINQQMFLLQQRQQQRPSQLRHSQEQTQTQSQRHNGKATVY* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0560 522 MobiDBLite consensus disorder prediction 147 182 - -
Apr9g0560 522 SMART brlzneu 367 431 IPR004827 GO:0003700|GO:0006355
Apr9g0560 522 CDD bZIP_plant_RF2 372 422 IPR044759 GO:0003700|GO:0006355
Apr9g0560 522 SUPERFAMILY Leucine zipper domain 371 421 IPR046347 GO:0003700|GO:0006355
Apr9g0560 522 MobiDBLite consensus disorder prediction 492 522 - -
Apr9g0560 522 MobiDBLite consensus disorder prediction 320 337 - -
Apr9g0560 522 Pfam bZIP transcription factor 371 429 IPR004827 GO:0003700|GO:0006355
Apr9g0560 522 MobiDBLite consensus disorder prediction 118 207 - -
Apr9g0560 522 MobiDBLite consensus disorder prediction 256 273 - -
Apr9g0560 522 MobiDBLite consensus disorder prediction 191 207 - -
Apr9g0560 522 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 369 432 IPR004827 GO:0003700|GO:0006355
Apr9g0560 522 Coils Coil 422 470 - -
Apr9g0560 522 MobiDBLite consensus disorder prediction 229 337 - -
Apr9g0560 522 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 57 518 - -
Apr9g0560 522 MobiDBLite consensus disorder prediction 1 86 - -
Apr9g0560 522 Gene3D - 370 435 - -
Apr9g0560 522 PANTHER BZIP TRANSCRIPTION FACTOR 57 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0560 Apr-Chr9 7931038 7934139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr9g0560 bZIP_1 5.6e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0560 9 7931038 7934139 Apr9g0560 9 7931038 7934139 ECH