Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0558 ATGAAAACTTGGTTCCTCCTCCTTGCCATTCTCCTCGCCGCCGCGACATTGCCACTTTCATCTCCGGTAACCACCGGCGCCGGAAAATGGGAGCTCCTACAGGAAAGCATCGGCATCGTTGCCATGCACATGCAGCTCCTCAACAACGACCGCGTCATCATCTTCGACCGCACCGATTTCGGCTTATCCAACCTCTCTCTCCCCAACGGCCAATGCCGCTACGATCCCAACGAAAGAACCGTTAAAACAGACTGCACCGCACACTCCGTTGAATACGATGTCGCATCCAACACCTTCCGCCCAACGTTCATCCAAACCAACGTCTGGTGCTCCTCCGGCTCCGTCACCGCCGACGGCACTTTGGTCCAGACCGGCGGCTTCAACGACGGCGACCGCAAAGTCAGAACCTACCGTTCATGTCCAACCTGCGACTGGCAAGAACTCACCGGCGAACTTGCCGTCCGACGATGGTACGCCACCAATCACTACCTCCCGGACGGTAAGCAGATCGTGATCGGCGGCAGAAGGCAATTCAACTACGAGTTTTACCCCAAAACTGATTCAACTGCGAAGAACGCTTACTCTTTACCGTTTCTAGTTCAAACCAGCGACCCTCACGAAGAGAACAACTTGTACCCCTTCGTTTTCCTCAATGTGGACGGCAACCTCTTCATCTTCGCCAACAACAGAGCTATTATGTTCGATTATACTAAGAACATTGTCGTTAGAACATTCCCGAATGTTCCAGGTGAAGATCCAAGGTGTTATCCTAGCACAGGTTCCGCTGTGCTTTTACCGTTGAGGAATCTACACGCGCTGTCATTGGAAGCAGAGGTTTTGGTTTGTGGTGGAGCCCCGAAAGGATCTTTTCGAAAAGCCAAAACGGGTAATTTTATCGGAGCCTTGAATACGTGTGCTCGGATTAAAATAACCGACCCGAATTCTAATTGGGTAGTGGAAACAATGCCGGGTGCTAGAGTCATGAGTGATATGGTTATGCTGGCAAACGGCAACGTTTTAATTATTAACGGAGCGGCGGCTGGGAGTGCTGGATGGGAACTGGCGCGTGACCCTGTTTTGGAACCGTTTCTTTATAAAACGGATAGTCCAATCGGGTCTCGGATCGAAATTCAAAGCCCGTCAAAGACACCACGGTTGTACCATTCCGCCGCCGTTCTGCTTCGAGATGGGAGGGTGCTCGTTGCTGGGAGCAACCCTCACGTTGGTTACAAATTCACCAACGTCATGTTTCCAACGGAACTTAGTGTGGAAGCGTTTTGGCCTTCGTATTTGGAACCTCGGTTTTCTAACGTGCGTCCTAGAATTGTGTCACCTGCGAGTCAAACAAAAGTGATGTATGGTGAGAAGTTGAATGTTCGGTTCGAGGTGGCAGCGATATTGGATAAAAATTTAGTGTCGGTGACAGTGTTGGCGCCGCCATTTAGCACGCATTCTTTCTCGATGAATCAGAGGTTGCTAGTGTTAGATGGTAGCAGCGTCACCTATGTGGAAGGGGCAACGTATGAAATTGATGTCACCAGCCCCCCTTCGCCTGTTCTCGCACCACCCGGCTTCTATCTATTGTTTGTGGTCCACCGAGAAATTCCCAGCGAGGGTGTCTGGATTCAGATCCTTTGA 1638 0.5092 MKTWFLLLAILLAAATLPLSSPVTTGAGKWELLQESIGIVAMHMQLLNNDRVIIFDRTDFGLSNLSLPNGQCRYDPNERTVKTDCTAHSVEYDVASNTFRPTFIQTNVWCSSGSVTADGTLVQTGGFNDGDRKVRTYRSCPTCDWQELTGELAVRRWYATNHYLPDGKQIVIGGRRQFNYEFYPKTDSTAKNAYSLPFLVQTSDPHEENNLYPFVFLNVDGNLFIFANNRAIMFDYTKNIVVRTFPNVPGEDPRCYPSTGSAVLLPLRNLHALSLEAEVLVCGGAPKGSFRKAKTGNFIGALNTCARIKITDPNSNWVVETMPGARVMSDMVMLANGNVLIINGAAAGSAGWELARDPVLEPFLYKTDSPIGSRIEIQSPSKTPRLYHSAAVLLRDGRVLVAGSNPHVGYKFTNVMFPTELSVEAFWPSYLEPRFSNVRPRIVSPASQTKVMYGEKLNVRFEVAAILDKNLVSVTVLAPPFSTHSFSMNQRLLVLDGSSVTYVEGATYEIDVTSPPSPVLAPPGFYLLFVVHREIPSEGVWIQIL* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0558 545 Gene3D - 24 434 IPR037293 -
Apr9g0558 545 SUPERFAMILY E set domains 435 544 IPR014756 -
Apr9g0558 545 Gene3D Immunoglobulins 438 545 IPR013783 -
Apr9g0558 545 PANTHER SECRETED PROTEIN-RELATED 24 544 - -
Apr9g0558 545 Pfam Glyoxal oxidase N-terminus 42 284 IPR009880 -
Apr9g0558 545 Pfam Galactose oxidase-like, Early set domain 439 544 IPR015202 -
Apr9g0558 545 CDD E_set_GO_C 435 544 IPR015202 -
Apr9g0558 545 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 24 544 - -
Apr9g0558 545 SUPERFAMILY Galactose oxidase, central domain 74 432 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0558 Apr-Chr9 7908275 7909912 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0558 9 7908275 7909912 Apr9g0558 9 7908275 7909912 ECH
Apr5g1637 5 20014915 20016549 Apr9g0558 9 7908275 7909912 PCT