Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0553 ATGAAGATCCAATGCGACGTATGCCACAAAGACGAGGCTTCTCTTTTCTGTACCGCCGACGAAGCCGCCCTCTGCCACGGCTGCGACCACCGCGTACATCATGCCAACAAACTCGCCTCCAAACACCAACGCTTCTCTCTTCTTCGCCCCTCTCCTAAACTTCACCCCCTTTGTGATCTTTGCCAGGAGAGAAGGGCTTTCATGTTTTGTCAACAAGATAGAGCGATTCTATGCGAAGAGTGTGACTCATCTATTCATTCTGCAAACGAACACACCCTTAAGCATGATAGGTTCCTTCTCACTGGTGTTAAGCTCTCTCCTTCACCAGCTTCTGATTCTTCTTGTAACTTTTCACATCAACCTTTGACTTTGACCACTCCTTCACCACCATCAACAACGACAACAACACTGCCTCTATCTTCCAACAAGGGTGTGGAAAGCTTGGTGAATGTTGAAGGGACTTCTTCTACAAGTGCTACATGTAGTAGCATATCGGAGTATTTGATAGAGACTCTTCCTGAGTGGCAGGTTGAAGATTTTCTCGATTCATATTCTGTTCCCTTTGGCTTCTGTAAGAGTGATGAGATGTTGCCACTGTTTGATGCTGAAGTTGAGGGGAATCTTGGTTCGTTCTCGGCAGAGGGTGTTGGGATCTGGGTTCCTCAAGCACCACCACCTCTTCTTTGTTCTTCACAAATGGATCGGGCTGGTGGGTGCTGTGAGATAAAGCAAGGGACAAACATCAAAGGAAACAGATCAAGGTTGAAGGATGATAACAACTTCACGGTTCCACAGATTAGTCCTCACTCCAATTCTAAAAGACCCAGGTTTCTATGGTAG 840 0.4655 MKIQCDVCHKDEASLFCTADEAALCHGCDHRVHHANKLASKHQRFSLLRPSPKLHPLCDLCQERRAFMFCQQDRAILCEECDSSIHSANEHTLKHDRFLLTGVKLSPSPASDSSCNFSHQPLTLTTPSPPSTTTTTLPLSSNKGVESLVNVEGTSSTSATCSSISEYLIETLPEWQVEDFLDSYSVPFGFCKSDEMLPLFDAEVEGNLGSFSAEGVGIWVPQAPPPLLCSSQMDRAGGCCEIKQGTNIKGNRSRLKDDNNFTVPQISPHSNSKRPRFLW* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0553 279 MobiDBLite consensus disorder prediction 112 139 - -
Apr9g0553 279 MobiDBLite consensus disorder prediction 257 272 - -
Apr9g0553 279 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 276 - -
Apr9g0553 279 MobiDBLite consensus disorder prediction 251 279 - -
Apr9g0553 279 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 276 - -
Apr9g0553 279 CDD Bbox1_BBX-like 57 100 - -
Apr9g0553 279 SMART bboxneu5 4 47 IPR000315 GO:0008270
Apr9g0553 279 SMART bboxneu5 53 100 IPR000315 GO:0008270
Apr9g0553 279 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Apr9g0553 279 CDD Bbox1_BBX-like 5 47 - -
Apr9g0553 279 Gene3D Classic Zinc Finger 1 95 - -
Apr9g0553 279 Pfam B-box zinc finger 56 93 IPR000315 GO:0008270
Apr9g0553 279 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0553 Apr-Chr9 7826169 7827456 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr9g0553 zf-B_box 1.3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0553 9 7826169 7827456 Apr9g0553 9 7826169 7827456 ECH
Apr9g0553 9 7826169 7827456 Apr5g1797 5 21276117 21277140 PCT