Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0548 ATGTTTCTTCTTGAGAGCCACATCGAACCAAGTTCTCACACCCTGTTCCCCTTCTCCCTTTCAATCGAAATTGGGATAATGGTGTCTCTGATTTCGCCGCCACCATCTTACAACATTCAATTACGCGAAACTCGCTTCTTCTCCACTCTCTTGCTCCCACCAAGAAACATCCACTTCAAACCCCAATGCAACTGCGAAATTCATAGATGGAAAACGGTACGGTGCGGAATTATCAGCGCCAACGCGTCTCCTCCACCGTCAACGTCGTTGACAAAGGAACCTCACAAATATTTCGATCATGTAATAATCACCGTTCGTGCTGGAGACGGAGGTCACGGAGCAGTTATGAACCAGAGAGTGAAAGAGGAACAGGAACAAGATAAGGGAAAATCGAAGAAGTTGAAGAAGAGAGGGTCTTTGAAGAGGGATTTCGATGGGTCCCTTATACTCCCTATGGGTGGTCATGGAGGTGATGTTGTCATCTATGCAGACGAAGCCAAAGACACTTTGCTTGAATTTCATAACAAAAGCCGCTATCATGCAAAACGCGGTCGAAATGTCGATGCAATGGGCGTTTTGACTTCGCAGCTACGCAATGGACTTGCTGCCCCCACTCTGCGTATTCCTGTTCCTGTAGGTACAGTTGTTAAAAGCAAACGAGGGAAGATGTTGGCTGATCTAGCGCAACCTGGTGATGAAGTTCTTGTTGCGAGGGGAGGCCAAGGAGGGATTAGCTTGTTAGAAATGCCACAGCATAAAAGGAAAAAGATGATGGCTTTGACAACTAATGTGATGAGAGATGACTCAGACAAGGTTTTAGTTCACGGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTTGCTGATGTTGGTCTAATTGGACTTCCAAATGCTGGGAAATCAACACTTCTTGCTGCCATTACACTTGCAAAACCTGATATTGCGGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTTGGCGGTGATCCCAGCTTGGGTGCAGGAATGTACTCATCTGAAGCTACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGCCGCAATTTTTTGAGGCACCTCAGGAGGACAAGGCTATTGGTCCATGTTGTTGATGCAGCGACTGAGAACCCTATAAATGATTACAGAACTGTTCGAGAAGAATTGCGAATGTATAATCCGGAGTACCTTGAACGGCCATACATTGTAGTTCTGAATAAAATTGACTTACCAGAGGCGAAGGACAGACTTTCATCATTGACTCAAGAAATTATGAGAATCGGCAACGATGGGGCTGCTTCTGAACCAAAACCAATCTCTGAAGTTCCAGCTCAATTGTCCAATGAAAGTGACAGGAAAGAAAAAAATCTTGAGGACTATCCACGACCTCTTTCTGTTGTTGGAGTTAGTGTTCTAAAGGGTATCAGGATTAACGAGATGTTAAAGGAGATAAGGTCGGCTTTAAGGAAGTGCTCTGATTCCAGTGAAGCATTGGCTTTCAGTGTGCCACCTTGA 1554 0.4505 MFLLESHIEPSSHTLFPFSLSIEIGIMVSLISPPPSYNIQLRETRFFSTLLLPPRNIHFKPQCNCEIHRWKTVRCGIISANASPPPSTSLTKEPHKYFDHVIITVRAGDGGHGAVMNQRVKEEQEQDKGKSKKLKKRGSLKRDFDGSLILPMGGHGGDVVIYADEAKDTLLEFHNKSRYHAKRGRNVDAMGVLTSQLRNGLAAPTLRIPVPVGTVVKSKRGKMLADLAQPGDEVLVARGGQGGISLLEMPQHKRKKMMALTTNVMRDDSDKVLVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLERPYIVVLNKIDLPEAKDRLSSLTQEIMRIGNDGAASEPKPISEVPAQLSNESDRKEKNLEDYPRPLSVVGVSVLKGIRINEMLKEIRSALRKCSDSSEALAFSVPP* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0548 517 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 70 510 IPR045086 GO:0003924|GO:0005525
Apr9g0548 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 293 502 IPR027417 -
Apr9g0548 517 Pfam 50S ribosome-binding GTPase 293 420 IPR006073 GO:0005525
Apr9g0548 517 MobiDBLite consensus disorder prediction 442 470 - -
Apr9g0548 517 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 292 502 IPR031167 GO:0005525
Apr9g0548 517 MobiDBLite consensus disorder prediction 117 139 - -
Apr9g0548 517 ProSitePatterns GTP1/OBG family signature. 352 365 IPR006074 GO:0005525
Apr9g0548 517 Pfam GTP1/OBG 153 289 IPR006169 -
Apr9g0548 517 ProSiteProfiles Obg domain profile. 95 291 IPR006169 -
Apr9g0548 517 CDD Obg 292 430 IPR031167 GO:0005525
Apr9g0548 517 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 70 510 - -
Apr9g0548 517 Gene3D GTP1/OBG domain 96 290 IPR036726 -
Apr9g0548 517 PRINTS GTP1/OBG GTP-binding protein family signature 294 314 IPR006073 GO:0005525
Apr9g0548 517 PRINTS GTP1/OBG GTP-binding protein family signature 315 333 IPR006073 GO:0005525
Apr9g0548 517 PRINTS GTP1/OBG GTP-binding protein family signature 350 365 IPR006073 GO:0005525
Apr9g0548 517 PRINTS GTP1/OBG GTP-binding protein family signature 367 385 IPR006073 GO:0005525
Apr9g0548 517 SUPERFAMILY Obg GTP-binding protein N-terminal domain 97 257 IPR036726 -
Apr9g0548 517 Gene3D - 291 510 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0548 Apr-Chr9 7671113 7675942 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0548 9 7671113 7675942 Apr9g0548 9 7671113 7675942 ECH