Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0547 ATGGATGTTGATCCTCGTCGATACGAAAACATTGAAAGAAACATTACTCTCACAATTCATGACAACACTGCATTTTCTTCAATTTCAAACTTTTCTCTTACTAGTTCTTCCACTATTTTAAGTTTCGCAGTCGCAGGTTTTCGTTTTAGCGCTATAAATGAAAATGATGTTCGTGACATCATTTTGTCATATCTCATACATAATTGCTTCAAAGAGTCAGCAGAGTCCTTCATTGCTTGCACTGGGATGCAGCAGCCTGCAGATTATTTGGAGAATATGGAAAAAAGAAGAAGAATTGTTCACTCTGTGCTGGAGGGAAATGCACATAAGGCTATTGAGCTCACTGAACAGCTGGCACAGGATATTCTAGAGAACAACAAGGATTTGCTGTTTGATCTTCTAAGCCTTCGTTTTGTAGAGCTTGTCTGCTCTAGGAAATGCACAAAAGCTTTGGAGTTTGCTCAGACCAAGTTAAGTCCTTTTGGAAAGGAGCAAAAGTACAGGGAAAAACTTGAAGATTTTATGGCCCTTCTTGCATATAATGATCCAGTGAAATCACCAATGTTTCATCTGCTTAGCTTAGAATATCGGCAACAGGTTGCAGATTGTTTGAATCGAACTATTCTTGCATACTTTAACCTTCCCAGCGACACCGCCATGGAGAAACTTATACAGCAGGTCACAGTAGTTAGACAATGCTTAAGCCAGGGCCTTGGCCAGGATGGGCCATTTTCCTTGAAGGATTTTCTTAAAAGTCGATGA 762 0.399 MDVDPRRYENIERNITLTIHDNTAFSSISNFSLTSSSTILSFAVAGFRFSAINENDVRDIILSYLIHNCFKESAESFIACTGMQQPADYLENMEKRRRIVHSVLEGNAHKAIELTEQLAQDILENNKDLLFDLLSLRFVELVCSRKCTKALEFAQTKLSPFGKEQKYREKLEDFMALLAYNDPVKSPMFHLLSLEYRQQVADCLNRTILAYFNLPSDTAMEKLIQQVTVVRQCLSQGLGQDGPFSLKDFLKSR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0547 253 PANTHER RAN BINDING PROTEIN 9-RELATED 24 251 - -
Apr9g0547 253 Pfam CTLH/CRA C-terminal to LisH motif domain 93 230 IPR024964 -
Apr9g0547 253 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 92 149 IPR006595 -
Apr9g0547 253 SMART ctlh 92 149 IPR006595 -
Apr9g0547 253 ProSiteProfiles LIS1 homology (LisH) motif profile. 53 85 IPR006594 GO:0005515
Apr9g0547 253 SMART toby_final6 145 240 IPR013144 -
Apr9g0547 253 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 24 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0547 Apr-Chr9 7666528 7669794 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0547 9 7666528 7669794 Apr9g0547 9 7666528 7669794 ECH
Apr9g0547 9 7666528 7669794 Apr5g1620 5 19846997 19850434 PCT