Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0536 ATGGGATCGGCTTGTTGTGTTGCTGTAAAGGATTCTAATATCCCTAACAGAACTGGAGGTCAAAATTTGCATAGAGATGTTGTATGCTCACCATCATGGAGTTTTCGATGGGATAGTCGGGGGCGCGTTGCTGGTGAAATTGAGAATCCTTCCTGTCACACATCTCAGGTGGTCAGTAGAAATGTAAGCATGGAGTTTAAAGGTTCATTAAGTTCTGAAAGAGGTAATTTATCAGATGGGGGAAGCATCCTGGAGAATTCTGTAACTCCCATTTCTCTCAAGTCCCCAGTTGATGAGACATTGGTTGCAAATCTGATGACCCCTTCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTAAAAAATCCAGCAGAATCTTCAATTCCAAATCTTTCATTTTCAATACCTTCAGTTTTCTCAACACCTACAGCAGATCGTTTGCCTAATCATAATTATCATCAACTTCCCAACTCTACCCCAACAAGATGGGCACATCGATCTCCAGGACACCCACTGTTGAGACAGATTTCTGATAGTAGGATTATGGGTCTGAAATCACCAGACAACTCAATTTCTGAAGGAAGGCCATCATTTGTACTCTCTACTTGCAGCAATGAAATGGCAGCTGGATCCCAATGCGGATCATCTGATGGCTGGTCAATGCGTACCTTTTCTGAGCTGGTGGCCTCATCCCAAAGGGAAAGGTGGTCTTTTGATAGTGAGTGTTTAGGCTCTGGTCGTCACAAGATAAGTGGATCCAGTAGCAGGTTCTCGTATTCTCCCTCCATGGATCTACAATCTTGTGGGGCTTGCTCAAAGCTTTTGACTGAGAGATCAACATGGAGCAACCAGAAGTTTATTGCCAATGGCGACCTCTCAGTTGTTGCTGTATTGGTCTGTGGTCATGCATATCATGCAGAGTGCTTAGAGGCTATGACACCAGAGGCAGATAGGTATGATCCAACTTGTCCAATTTGTATGATTGGAGATAAGCACTTGACAAAGTTGTCCAGAAAAGGTCATCGTTCTGAATCAGAGATAAAGGCCAAGAACCACAAGATATCCAGAAACCGTGTAGTTGATAGCTACCTTGATGGTGATTTTGATGTTTTTGATCGCCAAAAAGATACTGAATTGAGAGGAAATTTTTCAAAAATGGAGCCTAGCTCCAGTGCGAGGAGCTCATTTGGAAAGCCCTTCTTGAGGCGACACTTTTCACTTGGGTCCAAGTGGAGCCGATCGCTATCTGTGAATGATTCTGCCAGGAAGAAAGGCTTTTGGGCAAGATATCGTAAAGATTGA 1308 0.4343 MGSACCVAVKDSNIPNRTGGQNLHRDVVCSPSWSFRWDSRGRVAGEIENPSCHTSQVVSRNVSMEFKGSLSSERGNLSDGGSILENSVTPISLKSPVDETLVANLMTPSSDLSMSSNFSTVVKNPAESSIPNLSFSIPSVFSTPTADRLPNHNYHQLPNSTPTRWAHRSPGHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSQCGSSDGWSMRTFSELVASSQRERWSFDSECLGSGRHKISGSSSRFSYSPSMDLQSCGACSKLLTERSTWSNQKFIANGDLSVVAVLVCGHAYHAECLEAMTPEADRYDPTCPICMIGDKHLTKLSRKGHRSESEIKAKNHKISRNRVVDSYLDGDFDVFDRQKDTELRGNFSKMEPSSSARSSFGKPFLRRHFSLGSKWSRSLSVNDSARKKGFWARYRKD* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0536 435 PANTHER EXPRESSED PROTEIN 1 429 - -
Apr9g0536 435 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 429 - -
Apr9g0536 435 SUPERFAMILY RING/U-box 265 329 - -
Apr9g0536 435 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Apr9g0536 435 SMART ring_2 270 328 IPR001841 -
Apr9g0536 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 330 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0536 Apr-Chr9 7544977 7548891 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0536 9 7544977 7548891 Apr9g0536 9 7544977 7548891 ECH