Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0523 ATGTTCAGAAACCAGTACGATACGGACGTCACGACATGGAGTCCAGCGGGTAGGTTGTTCCAGGTGGAGTATGCGATGGAGGCGGTGAAGCAAGGTTCGGCTGCAATTGGCCTCCGATCGAAGACGCACGTGGTTCTCGCGTGCGTCAACAAGGCAAACTCCGAACTCTCCTCTCACCAGAAGAAGATCTTCAAGGTTGACAACCACATCGGTGTTGCCATCGCCGGACTCACCGCCGACGGTCGCGTTCTCTCCCGCTACATGCGATCCGAGTGCATCAACTACGCCTACACCTACGAGTCACCTCTTCCCGTTGGTCGTCTTGTCGTTCAGCTCGCCGACAAGGCTCAGGTTTGCACCCAGCGATCATGGAAACGTCCTTATGGAGTTGGTCTTCTGGTAGGTGGATTAGATGAATCAGGAGCTCACCTCTATTACAACTGTCCCAGTGGAAACTATTTTGAATATCAGGCTTTTGCAATTGGCTCTCGCTCTCAAGCTGCAAAGACTTACTTGGAACGCAGGTTTGAAAACTTTGTGGGTTCTTCAAGAGAAGATCTGATCAAAGATGCACTTATTGCAACTAGGGAGTCTTTGCAAGATCAGGAAACTGTTCAGCATCTGATTGATACTTTTGAGATCGTGAGGGAGGAAGAAGGCCCTACAACTGAACCTCAGCCAGCAACTGAGCAGGATGCTGCCACAGATCAGGGTTCTGGTGCAGATCAAGGTGGTGCTGAAGATCGTGGTGGCTCTCCCATGGACATTTGA 771 0.511 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDNHIGVAIAGLTADGRVLSRYMRSECINYAYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFVGSSREDLIKDALIATRESLQDQETVQHLIDTFEIVREEEGPTTEPQPATEQDAATDQGSGADQGGAEDRGGSPMDI* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0523 256 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 203 - -
Apr9g0523 256 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Apr9g0523 256 MobiDBLite consensus disorder prediction 224 238 - -
Apr9g0523 256 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 203 - -
Apr9g0523 256 MobiDBLite consensus disorder prediction 217 256 - -
Apr9g0523 256 Pfam Proteasome subunit 29 203 IPR001353 GO:0005839|GO:0051603
Apr9g0523 256 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Apr9g0523 256 CDD proteasome_alpha_type_1 6 203 IPR035144 GO:0019773
Apr9g0523 256 ProSiteProfiles Proteasome alpha-type subunit profile. 21 235 IPR023332 -
Apr9g0523 256 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Apr9g0523 256 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 223 IPR029055 -
Apr9g0523 256 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 201 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0523 Apr-Chr9 7331450 7334012 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0523 9 7331450 7334012 Apr9g0523 9 7331450 7334012 ECH