Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0513 ATGACAGTCACAACCGGAGGCGCCGTGGGTGTTCAGATCCAGCAGCAGAGTAGAATAGTGCTGCCAGATTTCCTACAGAGCGTGAATCTTAAGTACGTGAAATTAGGGTACCACTACTTGATCTCCAACCTACTCACCCTATTCCTTGTTCCCTTGATCCTCATCACGCTAATCCAAGTCTCCCAAACCACCGACCTTGACCATCTCCGCCACGTGTGGCTCCACCTCCAATACAACCTCCTCACAATCCTCACATGTTCCGCTTTCTTAGTCTTCGGTCTCACGCTCTACGCTGTCACGCGCCCACGCTCCGTCTACCTCGTCGATTTCTCCTGCTTCCGCCCCGCCGATCACCTTAAAGCCCCCTTCCACAGCTTCATGGAACATTCTCGTCTCACCGGCGACTTCGAAGATTCCTCCCTCGAGTTCCAGCGCAAGATCCTCGAACGCTCCGGTCTCGGCGAAGAAACCTACGTCCCCGAGGCCATGCATTTCATCCCTCCTCGCCCTTCCATGGCCGCCGCAAGAGCCGAGGCCGAACAGGTCATGTTTGGCGCCTTGGATAACCTTTTCCTTAATACCAATCTAAAACCTAAGGATATTGGTATTCTTGTCGTCAATTGCAGCTTGTTTAACCCCACCCCATCCCTCTCTGCCATGATTGTTAACAAGTACAAGTTGAGGGGTAACATCAGGAGCTTCAATTTGGGTGGAATGGGGTGCAGTGCTGGCGTGATTGCTGTTGATCTTGCTAAAGACTTGTTGCAGGTTCATAGGAACACTTATGCTGTTATTGTTAGCACTGAGAACATTACTCAAAATTGGTACTTTGGGAATAAGAAGTCCATGCTTATTCCCAATTGCTTGTTCCGCGTTGGATGTTCTGCACTGTTGCTCTCTAACAAGCCTGCGGATAGGAGGAGGGCGAAGTATAGGCTTGTACATGTTGTGAGGACCCACCGTGGTGCTGATGATAAGGCATTTCGGTGTGTTTATCAGGAGCAGGATGATGCTGGGAAGACTGGGGTTTCGTTGTCTAAGGATTTGATGGCGATTGCTGGTGGAGCTCTTAAGACCAATATCACCACCCTTGGCCCCCTGGTGCTCCCTATTAGTGAGCAGCTTCTGTTTTTCGCTACTTTGCTCATGAAGAAGTTGTTTAAGGCTGATGTGAAGCCTTATATACCGGATTTTAAGCTTGCTTTCGATCATTTCTGCATACATGCCGGGGGCAGGGCAGTGATTGATGAGTTGGAGAAGAACCTGCAGCTGCTCCCTGTGCATGTAGAGGCTTCTAGGATGACGCTTCACCGATTTGGGAACACTTCTTCAAGCTCCATTTGGTATGAGTTGGCTTACATTGAAGCCAAAGGGAGGATGAGGAAGGGTAACAGGGTTTGGCAAATTGCGTTTGGAAGTGGTTTTAAATGTAACAGTGCTGTTTGGCAAGCACTGCGAAATGTCAGGCCATCTCATAATGGACCCTGGGAAGATTGCATTGATAGGTATCCGGTGGAAATACTCACATAG 1530 0.4941 MTVTTGGAVGVQIQQQSRIVLPDFLQSVNLKYVKLGYHYLISNLLTLFLVPLILITLIQVSQTTDLDHLRHVWLHLQYNLLTILTCSAFLVFGLTLYAVTRPRSVYLVDFSCFRPADHLKAPFHSFMEHSRLTGDFEDSSLEFQRKILERSGLGEETYVPEAMHFIPPRPSMAAARAEAEQVMFGALDNLFLNTNLKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVIVSTENITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFATLLMKKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWQALRNVRPSHNGPWEDCIDRYPVEILT* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0513 509 CDD CHS_like 87 482 - -
Apr9g0513 509 SUPERFAMILY Thiolase-like 314 483 IPR016039 GO:0016746
Apr9g0513 509 PIRSF Very_long_ch_3-ktacl-CoA_syn 23 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Apr9g0513 509 Gene3D - 119 484 IPR016039 GO:0016746
Apr9g0513 509 PANTHER 3-KETOACYL-COA SYNTHASE 4 17 507 - -
Apr9g0513 509 SUPERFAMILY Thiolase-like 91 309 IPR016039 GO:0016746
Apr9g0513 509 PANTHER 3-KETOACYL-COA SYNTHASE 17 507 IPR012392 GO:0006633|GO:0016020|GO:0016747
Apr9g0513 509 Pfam FAE1/Type III polyketide synthase-like protein 97 386 IPR013601 GO:0006633|GO:0016020|GO:0016747
Apr9g0513 509 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 402 483 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0513 Apr-Chr9 7227862 7231848 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0513 9 7227862 7231848 Apr9g0513 9 7227862 7231848 ECH