Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0509 ATGGGAATGCAACGAGGAGTAGCAGTGAGTGTTGTCACAATGTTGTTAATGGTTGGGTTAACAATGGGTCTGAGTTCAAGAATCGAATGGTCTGCGTTAAGGGAGCTTCGTTCATCGTTGGGGATAAGGGCAAAGGATTGGCCCATAAAAACCGAACCGTGCAGGAACTGGACCGGGGTTCAGTGCCGGAACGGTCGAGTTGTGGGTATAAACGTGTCTGGTTTGAGGAGAACCCGGTTGGGGAAACTGAACCAAAGATTCGAAGTGGATTCTCTTGTTAATTTCACCCTTTTGGAATCGTTTAACGCTTCTGGGTTCCTGCTAAATGGGTCTATACCTGTGTGGTTTGGTCAAAGCCTTGGTGCACTCCAAGTGCTTGACCTAAGTTCTTGTTTCATAACGGGTTTGATTCCTGATTCGATTGGGCGGTTGAGTGCGTTGAAGGTTTTGTTTCTCTCAGGGAATGGTCTTGTTGGTACAATGCCTTCAACGCTTGGGTTGTTGTCTAATCTTTCTGCGCTTAATCTCTCTGGTAACTCTCTTTCAGGAACCCTGCCTAACTCTTTGTCTAAGCTTGGGAATCTTAGAAGGCTTGATCTTTCTTCTAATTACTTATCTGGGTCTGTTCCACCCGAACTGGGTGCCCTTTCAAGACTTCAAATTTTGAATCTTTCTGGTAATTCCCTCATTGCTGCGATTCCCTCTCAATTGGGAAAACTTTCCAAGTTGTTTGAGCTTGATCTTAGCATGAATTTTCTGTCTGAGTCGTTGCCGGCTGGTTTGTTTTCTTCCGGCCTTTTGGGCCTTAAGATTCTCAGTCTCAAAGGGAATTTACTTGTTGGTGCTCTTCCAGCTACTCTGGGGTCATTGCGCAGCTTGCAGTTTCTTGATGTGTCTAGTAACAACCTCACTGGGACACTGCCTAATTTCTCTAGTTGGAATGTTAGTTCTGGTGCTGTATTCAATCTCTCAAACAATTTGTTCTATGGACCGCTAAATGTGTCGCTGGACAAGTTTAAAATGATTGATTTATCGAGTAATTATTTGGAAGGTGAGATGCGAGGTGGTGGTGATGTTAGTCATGTTAGTGTAGCTAGAAATTGCCTACCGATGCTTCCAAACCCGAGGGATTTGGATGAGTGTAGAGCGTTTTACATGCAGAGAAATTTACCCTTTGTGTTCCCAGAATCTGAGTCCCGGCACCGCAGAAGAGTGATAATCATACTGGCAGGAGTATTTGGTGGGCTTGGAATTATTGTGCTGCTGACATTGGTCCTCATACTGGTTCTAAAACAATGTCATAATCGTAAAAGCTTGGAAGTTCAGAGTGGGACCAAAGATGGAGGGCCTGTTCCAAAAGGGGAGAGTCCCCCACCTCCTAAGGATCCTGTCTTTGTGACTGCTGTGGGAGAAGCATTTAGTTTTGAGCAAATTCTCGGTCTGACTGGCAATTTTGCTGAAGCAAATATCCTAAAGCATGGTCATTCCGGGGACCTTTTCTTGGGAACCTTGGAAAATGGAGCAACTGTGGTTGTCAAAACGGTAGACGTAAGTTTGTTTAAGAGAGAATCGTACATTGTGGAACTGGGATTATTAAGCAAGGTTTCACATGCAAGATTGGTTCCAATCTTGGGTCACTGCTTGGAGAATGAGAATGTGAAATGTATCATTTACAAATATATGCCAAATGGAGATTTGGCTTCTTCCTTGCACAGAGTCATTGGTCCAGATGGTAAATTACAGTCCCTGGATTGGATCACGAGATTGAAGATTGCAATAGGAGCTGCTGAAGGCCTTGCTTACCTACATGAGTGCATCCCTCCCTTTGTTCACAGAGATGTCCAAGCTAGCAGTATACTTCTTGATGATAAATTCGAAGTGCGACTTGGAAGTTTGACTGAGGTTACTGCACAAGGAGATCTTCATCAGAGAGTCATCTCAAGGGTTTTCAGCAAGCCACTTTCTTCCAATCCAGGCGATTCTGGCAAATCATCAGTGACATGTGCCTACGACGTCTACTGTTTTGGGAAGATTTTACTCGAGCTCGTTACTGGTAATATTGAAGTCAGCAAATCAGATGATGCATCCACAAAAGTGTGGTTAGAGCAAACGTTGCCTTACATCAGTATATACGATAAAGAACGTCTCATTAAGATTGTTGACCCATCATTAATCGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAATGCATGCTTGAACCCCAAGGCTTCGAAACGCCCTCCTATGAGACATGTCCTCAAAGCACTGGAAAATCCATTGAAGATTGTAAGAGAAGAAAATACTAGCTCAGCAAGGTTGAGAACAAATTCATCTAGCAAATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACACAGCTCATCATCAGAGAGTGCTGCTGCCGCAGTGAATTCAAACAAGGGAGGTACTAGTGACAGTAAAAAATCAGGAAAAGTAGGTTCGCAAAGTAGTGGTGGAAACGATCACTCGTCTTCCAATAAAAGGTCATCCAATGAAATTTTTCCTGAGCCATTGGACATGCAAGATGTTGAGGCTAGAGAGTCAAGATAA 2589 0.4392 MGMQRGVAVSVVTMLLMVGLTMGLSSRIEWSALRELRSSLGIRAKDWPIKTEPCRNWTGVQCRNGRVVGINVSGLRRTRLGKLNQRFEVDSLVNFTLLESFNASGFLLNGSIPVWFGQSLGALQVLDLSSCFITGLIPDSIGRLSALKVLFLSGNGLVGTMPSTLGLLSNLSALNLSGNSLSGTLPNSLSKLGNLRRLDLSSNYLSGSVPPELGALSRLQILNLSGNSLIAAIPSQLGKLSKLFELDLSMNFLSESLPAGLFSSGLLGLKILSLKGNLLVGALPATLGSLRSLQFLDVSSNNLTGTLPNFSSWNVSSGAVFNLSNNLFYGPLNVSLDKFKMIDLSSNYLEGEMRGGGDVSHVSVARNCLPMLPNPRDLDECRAFYMQRNLPFVFPESESRHRRRVIIILAGVFGGLGIIVLLTLVLILVLKQCHNRKSLEVQSGTKDGGPVPKGESPPPPKDPVFVTAVGEAFSFEQILGLTGNFAEANILKHGHSGDLFLGTLENGATVVVKTVDVSLFKRESYIVELGLLSKVSHARLVPILGHCLENENVKCIIYKYMPNGDLASSLHRVIGPDGKLQSLDWITRLKIAIGAAEGLAYLHECIPPFVHRDVQASSILLDDKFEVRLGSLTEVTAQGDLHQRVISRVFSKPLSSNPGDSGKSSVTCAYDVYCFGKILLELVTGNIEVSKSDDASTKVWLEQTLPYISIYDKERLIKIVDPSLIVDEDLLEEVWAMAIVANACLNPKASKRPPMRHVLKALENPLKIVREENTSSARLRTNSSSKSWSTAFFGSWRHSSSSESAAAAVNSNKGGTSDSKKSGKVGSQSSGGNDHSSSNKRSSNEIFPEPLDMQDVEARESR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0509 862 MobiDBLite consensus disorder prediction 804 862 - -
Apr9g0509 862 MobiDBLite consensus disorder prediction 441 461 - -
Apr9g0509 862 SUPERFAMILY Protein kinase-like (PK-like) 463 762 IPR011009 -
Apr9g0509 862 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 25 270 - -
Apr9g0509 862 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 284 817 - -
Apr9g0509 862 ProSiteProfiles Protein kinase domain profile. 485 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0509 862 SUPERFAMILY L domain-like 45 349 - -
Apr9g0509 862 Gene3D Transferase(Phosphotransferase) domain 1 561 786 - -
Apr9g0509 862 PANTHER RECEPTOR-LIKE PROTEIN 55 25 270 - -
Apr9g0509 862 PANTHER RECEPTOR-LIKE PROTEIN 55 284 817 - -
Apr9g0509 862 PRINTS Leucine-rich repeat signature 195 208 - -
Apr9g0509 862 PRINTS Leucine-rich repeat signature 216 229 - -
Apr9g0509 862 MobiDBLite consensus disorder prediction 804 845 - -
Apr9g0509 862 SMART LRR_typ_2 266 289 IPR003591 -
Apr9g0509 862 SMART LRR_typ_2 168 191 IPR003591 -
Apr9g0509 862 SMART LRR_typ_2 192 215 IPR003591 -
Apr9g0509 862 SMART LRR_typ_2 144 167 IPR003591 -
Apr9g0509 862 SMART LRR_typ_2 120 143 IPR003591 -
Apr9g0509 862 SMART LRR_typ_2 290 314 IPR003591 -
Apr9g0509 862 SMART LRR_typ_2 240 264 IPR003591 -
Apr9g0509 862 SMART LRR_typ_2 216 239 IPR003591 -
Apr9g0509 862 Gene3D Phosphorylase Kinase; domain 1 462 560 - -
Apr9g0509 862 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Apr9g0509 862 Pfam Leucine Rich Repeat 194 214 IPR001611 GO:0005515
Apr9g0509 862 Pfam Leucine Rich Repeat 123 143 IPR001611 GO:0005515
Apr9g0509 862 Pfam Leucine Rich Repeat 170 192 IPR001611 GO:0005515
Apr9g0509 862 Gene3D Ribonuclease Inhibitor 188 369 IPR032675 -
Apr9g0509 862 Pfam Protein tyrosine and serine/threonine kinase 490 759 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0509 Apr-Chr9 7132374 7137587 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Apr9g0509 PK_Tyr_Ser-Thr 4.7e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0509 9 7132374 7137587 Apr9g0509 9 7132374 7137587 ECH