Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0484 ATGGAGTTCATGGTTCGGTGTAGTTCGCGTACGCTATCTGGATTTCTTTGTAACCTTCGAATTGCCGTCGTTGTTTTCGAGATTGTATTGATATTGGCATGGTTGGGAGCCAATAATGCAAAACCACAAGAGCATCATTTTCAAGGGGGAGGCTTGGAGAGGAGGATTGCGAACACTGAGTCACACTCTTGCATACATGACCAGATACTCGAAAAGAGAAAGCGACCTGGTCGCAAGGTGTATTCAGTTACCCCGCAGGTTTACGAGCCTGGTCTCATGAAACCCCTCCAGCATAAAGGTAGGGTGTTACTTGGTGTATCAACATCATCAGAGCCTCAAGAGAATGAAAAGAAACCTATTAGGATATATCTAAATTATGATGCTGTTGGTCACTCCACTGACAGGGATTGTCAAAAAATTGGTGATATTGTCAAGCTTGGGGAGCCTCCCTTGACTTCTCTTCCTGGTCTGCCTTGTTGTAAGCCTCTTGCTGATCCTCCGGTCTTTGGTGATTGTTGGTATAACTGCACTGCTGAAGATATCTCAGGAGAGGACAAAAAACATCGCCTTCGGAAGGCATTAGGTCAGACAGCTGACTGGTTTCGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACTTGCGATTAAGTGGATACTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCATGAATATGTTGAAGAGGGAGTCTCTGATGCTGACTTAGTTCTTTTGGTGACTACAAGACCTACAACTGGGAATACACTTGCTTGGGCAGTGGCATGTGAACGGGATCAATGGGGCCGTGCCATAGCTGGACATGTTAACGTTGCTCCTCGTCACTTGACAGCTGAGGCAGAGACTTTGCTTTCAGCTACTCTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCTCATGCATTTGCTCATTTTAGAGATGAAAGGAAAAGACGTCGTAATAAGGTTATTGAACAAGTTATGGATGAAAAGATTGGGCGGATGGTAACACGTGTGGTGCTTCCACGTGTAGTCATGCATTCAAGACATCACTATGCGGCTTTTTCAGGAAATTTTACTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAGAGGCTTCTGATGAATGAGATCATGACTGGTTCTGTGGATACAAGATCTGTAGTTTCAAAAATGACACTAGCTCTCTTAGAAGATAGCGGATGGTACAAAGCTAATTACAGCATGGCTGACCGTCTTGATTGGGGTCGCAACCAGGGTACTGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAGGGGGCATATCATTGTAACACAACACAGTTTTCAGGTTGTACTTATAACAGAGAAGCAGAGGGTTACTGCCCAATTCTAACCTACAGTGGAGACCTTCCTCAGTGGGCTCAGTATTTTCCTCAAGCTAATAAAGACACTAACAGTGCACGGGCACCCGATAGAATGCTAGGTGAAGTCCGAGGAAGTAACTCTAGGTGTATGTCCTCATCATTGGTACGCACAGGATTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGGTGCATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCGGGCTGGTGGCTCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATATCATGAGCTGTGCAACACAGATCTAGTGGTTGTGTCTGGGAAATGTCCCAATGCTTGTAATTTCAATGGAGATTGTGTTGATGGAAGGTGCCACTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAGAGGTTCCTGCCCCGGCAATTGCACTGGCAATGGCATGTGCCTCTCCAATGGAATATGCAAATGTAAAACTGGCTATACTGGCATTGACTGTTCCACTGCTGTTTGTGACGAGCAGTGCAGTCTTCATGGTGGGGTTTGTGATAATGGAGTTTGCGAGTTCCGCTGTTCTGACTATGCAGGATACACTTGCCAGAACAGCTCCATGCTCCTCTCCACTCTTTCAATTTGCAAAAATGTGCTGGGAAATGATATTTCTGGGCAGCATTGTGCACCCAGTGAACCTAGCATACTACAGCAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCACCGATTATTCCCTGGTGGTGCTAGGACATTATTTAATATATTTGGCAGCAGCTATTGTGATGAGGCAGCTAAAAGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGAGAAGGATGGAGACAACAGGCTACGAGTATGTCATTCTGCATGTCAGTCTTATAATCTAGCATGTGGAGCTTCACTGGACTGCGGTGATCAAACCCTTTTCAGCAGCGAGGGGGAGGAAGGGGGTCAATGCACTGGCTCTGGTGAGATGAAATTGTCATGGTTGAATCGACTGAGAAGTAGTTTTTCTTTGAGAAAGAGTTCCTCCAAAGGAATATCTGTAAGATATAGGCAATTCTAG 2517 0.4585 MEFMVRCSSRTLSGFLCNLRIAVVVFEIVLILAWLGANNAKPQEHHFQGGGLERRIANTESHSCIHDQILEKRKRPGRKVYSVTPQVYEPGLMKPLQHKGRVLLGVSTSSEPQENEKKPIRIYLNYDAVGHSTDRDCQKIGDIVKLGEPPLTSLPGLPCCKPLADPPVFGDCWYNCTAEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPHEYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNKVIEQVMDEKIGRMVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKDTNSARAPDRMLGEVRGSNSRCMSSSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCPRAGGSIQFPGFNGELICPAYHELCNTDLVVVSGKCPNACNFNGDCVDGRCHCFLGFHGHDCSRGSCPGNCTGNGMCLSNGICKCKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSTLSICKNVLGNDISGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARTLFNIFGSSYCDEAAKRLACWISIQKCEKDGDNRLRVCHSACQSYNLACGASLDCGDQTLFSSEGEEGGQCTGSGEMKLSWLNRLRSSFSLRKSSSKGISVRYRQF* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0484 838 Gene3D Leishmanolysin , domain 2 313 438 - -
Apr9g0484 838 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 487 810 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Apr9g0484 838 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 1 486 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Apr9g0484 838 ProSiteProfiles EGF-like domain profile. 613 645 IPR000742 -
Apr9g0484 838 Gene3D - 112 303 - -
Apr9g0484 838 PRINTS Leishmanolysin (M8) metalloprotease family signature 248 277 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Apr9g0484 838 PRINTS Leishmanolysin (M8) metalloprotease family signature 401 430 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Apr9g0484 838 Gene3D - 574 616 - -
Apr9g0484 838 ProSitePatterns EGF-like domain signature 1. 633 644 IPR000742 -
Apr9g0484 838 Pfam Leishmanolysin 486 577 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Apr9g0484 838 Pfam Leishmanolysin 174 485 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Apr9g0484 838 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 487 810 - -
Apr9g0484 838 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 1 486 - -
Apr9g0484 838 Gene3D Laminin 617 647 - -
Apr9g0484 838 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 115 579 - -
Apr9g0484 838 Gene3D Leishmanolysin domain 4 482 573 - -
Apr9g0484 838 ProSitePatterns EGF-like domain signature 2. 633 644 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0484 Apr-Chr9 6800262 6809176 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0484 9 6800262 6809176 Apr9g0484 9 6800262 6809176 ECH