Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0483 ATGGCCCTAAACCCAAACTCAAAAACCTCCCCACTCTTCCACCTCCTCCTCTTCTTATTAGGTAACATGGCATCTGCCACAGTGTTTACCATCCGAAACCAATGCAGTTACACAATTTGGCCCGGTACACTTTCCGGCAACGGCGCCGCCATTCTCGGCAGCGGAGGTTTTTCTCTGGCGCCGGGCGCGTCCGTTCAGCTCACCGCACCGTCGGGTTGGTCCGGCCGCTTCTGGGCGAGGACGGGGTGCAACTTCGACGGCGCCGGAAACGGACAATGCGCCACCGGAGATTGCGCCGGAGGACTGAGATGCACCGGAGGAGGTGTGCCGCCGGTGACGCTAGCGGAATTTACGATCGGTAGCAGCGGTAACGGCAATAAAGATTTTTACGACGTGAGTCTTGTGGACGGTTACAATGTGGAAATGGGGGTAAGGGCTACCGGAGGAACCGGTGATTGCCAGTACGCAGGGTGCGTTGCGGATTTGAACGGTTTATGTCCGGCGGAGTTGCAAGTGAGAAGCGGTGGCGGTGCGGTGGTGGCGTGCAAGAGCGCGTGTGCGGCTTTTAATAGGGCGGAGTTTTGCTGTACCGGCGAGCACTCGTCGCCGCAGACATGTTCGCCGACACAATATTCGGAAATGTTTAAGAAGGCGTGTCCCAGTGCGTATAGTTACGCTTACGATGATGCTTCGAGCACTTGCACGTGTTCTGGCGCCGATTATAGTATCACTTTTTGCCCTGCGGGATCCTCCACTCGTCATTAA 765 0.566 MALNPNSKTSPLFHLLLFLLGNMASATVFTIRNQCSYTIWPGTLSGNGAAILGSGGFSLAPGASVQLTAPSGWSGRFWARTGCNFDGAGNGQCATGDCAGGLRCTGGGVPPVTLAEFTIGSSGNGNKDFYDVSLVDGYNVEMGVRATGGTGDCQYAGCVADLNGLCPAELQVRSGGGAVVACKSACAAFNRAEFCCTGEHSSPQTCSPTQYSEMFKKACPSAYSYAYDDASSTCTCSGADYSITFCPAGSSTRH* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0483 254 SMART tha2 29 247 IPR001938 -
Apr9g0483 254 SUPERFAMILY Osmotin, thaumatin-like protein 28 248 IPR037176 -
Apr9g0483 254 PIRSF PR5 3 254 IPR001938 -
Apr9g0483 254 Pfam Thaumatin family 33 247 IPR001938 -
Apr9g0483 254 PANTHER PATHOGENESIS-RELATED PROTEIN 5 23 247 - -
Apr9g0483 254 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Apr9g0483 254 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Apr9g0483 254 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Apr9g0483 254 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Apr9g0483 254 PANTHER OS03G0233200 PROTEIN 23 247 IPR001938 -
Apr9g0483 254 CDD TLP-PA 28 246 - -
Apr9g0483 254 Gene3D Thaumatin 27 247 IPR037176 -
Apr9g0483 254 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Apr9g0483 254 ProSiteProfiles Thaumatin family profile. 26 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0483 Apr-Chr9 6797024 6798364 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0483 9 6797024 6798364 Apr9g0483 9 6797024 6798364 ECH