Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0477 ATGAGTCATGTGTTTCTCTTCGTTTTCCTCATACTAAGCATTTTTCTTTCCTTAAATGTCAAAGCACAACAGAATTACTCAGGAAATTCAGTACTTAGCCGCAAGAACTATGACAAAATGGGTCCTTCTCCTTCATTCCTTTACACTTGCAATGGCCTTAACAAATCCTGCATGGCTTTTCTCATCTTCAAATCAAAACCTCCTTACAACTCCATACCTACAATTTCCAACCTCACATCATCAAACCCAGAAGAGCTTGCCAGAATCAATGATGCCACTTTTCTCACAGTGTTCCCAAATGGCAAAGAGGCGATTGTTCCTTTGAACTGTTCTTGTTTAACTAGGGACTATTACCAAGCTGAAACCAAATACATATTGGGTCCAAACCCAACGTATTTCACAGTGGCAAATGACACGTTTCAGGGTTTGGCCAGTTGTGATTCTCTCAAGCGTGCCAACCCATATGGGGAATTTGATTTGCTTACTGGCATGAAATTGCACGTACCACTCAGATGCGCTTGTCCAACATGGCATCAGGCCAGAAATGGCACCAAGTATTTGCTGACATACTCGGTAAACTGGGATGATAACATCTCAAATGTTGCTACAAGGTTCAATGTATCAGCAGGTAATCTAGTTGATGCTAATGGTTTTTCCACACAAACACAAACCCTTTATCCATTCACAACTATTTTGATTCCTTTGCCTAGTGAACCAGTGAGTTCAATGACCAAAGTTGTGAATGATCCACCAACCATGTCACCTCTTCCTGTTTGCACCTCAAAAAAGTGTAGCTCAAAGAGAAAACTCCACACTGCAATTGCCACCACAGGGGGTTCCTTGCTGGTTGTGTGTGTTTTTTTATCCATGGTTTTTCTGTTGAGAAAGAGGTTCTTTAAGGGAGGTAAAGAGGGTGAGAAAATAAAGCGGGTCTGTGCAGAAGATATCCGCGGGGAAATAGCAATTATTGAAGACGACTCCTCCAAAGTTTACGGTTTTGAGGAAATAATGGAGGCAACTGAAGATTTTAGTTCAAAGAATAGAATTGAAGGTTGTGTGTTTCGTGGGGTATTTGGCAATGGCAGGGACATATTGGCAATCAAAAAAATGAAAAGAAATGCGTCCAAGGAAGTGATTTTGCTGAAAAGGATCAATCATTTCAATCTGATAAAGCTGCAAGGTTACTGTGAAAATGAAGGGTGCCTCTACCTTGTTTATGAATATATGGAAAATGGCTCCTTGAGAGAATGGCTTAGCAAAAGCAGGTCCACGGAGCATCAGAGTTGGGTAAAGAGGATCCAGATTGCTCTGGATATTGCCAATGGACTTGAGTATCTTCACAACTTCACAGAACCTTGCTACGTACACCGGGACATTAACAGTGGAAACATTCTACTAAACAAAGATCTAAGGGCCAAGATAGCAAATTTTACTCTCGCTGAAGAATCAGAAAGGAAAATAACTTCTAGCTGTGCCACATCGCATGACGTTAAAGTGAAGGGTTTTATGGCTCCAGTGTATCTGGAGGCTGGGATAGTCACTACCAAGATGGATGTTTATGCCTTCGGGGTGGTGCTGTTGGAATTAATCACGGGTAAAGATTCTATTGCCATGCAAGATGGAAGAGAAGTAATGCTTCATGCAGTCATAGTAAATCTCATTGGTACAGAAAATGAAGAAGAGAAGGTGAGTTTGTTCATTGATTCTAGCCTCACTGGACAGTGGGAAAGTATGTGCTCTCCAGCTAGTTAA 1752 0.4132 MSHVFLFVFLILSIFLSLNVKAQQNYSGNSVLSRKNYDKMGPSPSFLYTCNGLNKSCMAFLIFKSKPPYNSIPTISNLTSSNPEELARINDATFLTVFPNGKEAIVPLNCSCLTRDYYQAETKYILGPNPTYFTVANDTFQGLASCDSLKRANPYGEFDLLTGMKLHVPLRCACPTWHQARNGTKYLLTYSVNWDDNISNVATRFNVSAGNLVDANGFSTQTQTLYPFTTILIPLPSEPVSSMTKVVNDPPTMSPLPVCTSKKCSSKRKLHTAIATTGGSLLVVCVFLSMVFLLRKRFFKGGKEGEKIKRVCAEDIRGEIAIIEDDSSKVYGFEEIMEATEDFSSKNRIEGCVFRGVFGNGRDILAIKKMKRNASKEVILLKRINHFNLIKLQGYCENEGCLYLVYEYMENGSLREWLSKSRSTEHQSWVKRIQIALDIANGLEYLHNFTEPCYVHRDINSGNILLNKDLRAKIANFTLAEESERKITSSCATSHDVKVKGFMAPVYLEAGIVTTKMDVYAFGVVLLELITGKDSIAMQDGREVMLHAVIVNLIGTENEEEKVSLFIDSSLTGQWESMCSPAS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0477 583 Gene3D LysM domain 187 234 IPR036779 -
Apr9g0477 583 Gene3D Transferase(Phosphotransferase) domain 1 338 568 - -
Apr9g0477 583 SUPERFAMILY LysM domain 188 234 IPR036779 -
Apr9g0477 583 Pfam Protein tyrosine and serine/threonine kinase 370 544 IPR001245 GO:0004672|GO:0006468
Apr9g0477 583 SUPERFAMILY Protein kinase-like (PK-like) 327 548 IPR011009 -
Apr9g0477 583 ProSiteProfiles LysM domain profile. 188 233 IPR018392 -
Apr9g0477 583 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 577 - -
Apr9g0477 583 Pfam LysM domain 190 234 IPR018392 -
Apr9g0477 583 ProSiteProfiles Protein kinase domain profile. 343 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0477 583 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 6 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0477 Apr-Chr9 6680419 6682170 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Apr9g0477 PK_Tyr_Ser-Thr 2.9e-35 CL0016