Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0473 ATGTTGGGTATGGGAAGTGCCTTGGAGACTCTATGTGGGCAAGCATACGGTGCAGGTCAGATCCGAATGTTGGGGGTGTACATGCAAAGATCATGGGTCATCTTGTTGACCACAGCCATTCTTTTGGTACCTGTTTATGTTTGGTCTCCACCCATCTTGGAGCTCATTGGACAGACTAATCAGATCTCAGTAGCAGCTGGAAAATTTGCTGTGTGGATGATACCGCAATTGTTTGCATACGCCCTGAACTTTCCGATCCAAAAGTTCTTACAAGCACAAAGGAAAGTCCTGGTGATGTTATGGATATCAGCAGTTGTTTTGGTGCTGCATACAATTTTTAGTTGGCTTTTAATATTAAAGTTGGGATGGGGTCTAACTGGAGCAGCAATTACACTTAATACATCATGGTGGTTGATTGTGATTGCACAATTATTGTACATTTTTATCACCAAGTCAGAAGGAGCTTGGAGTGGATTTACATGGCTAGCATTTGCAGACTTGTTTGCTTTTGTGAAACTCTCATTGGCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTACTTGATGATACTGGTGGTGATAACAGGGCGTTTGAAAAATCCTCTGGTACCTGTTGATGCCATATCTATCTGCATGAACATAAATGGCTGGGATGCCATGATTGCAATTGGGTTCAATGCTGCAATAAGTGTGAGAGTATCAAATGAACTTGGAGCTGGTGATTTCCGAGCTGCCAGGTTTTCAGTGTTGGTGGTTTCCATCACATCAGTATCCATAGGTGTTGTTGCCATGATCATAGTACTAGCAACCAGGGATTACTTTCCCTACTTGTTCACCTCAAGCATTGCAGTTGCCGAGGAAACAACTAAACTTGCTGTCTTGCTTGGTGTCACAGTAGTTCTGAACAGCCTTCAACCCGTCCTATCTGGTGTTGCTGTTGGAGCTGGCTGGCAGTCTCTGGTAGCATACATCAATATTGGGTGCTACTATGTAGTTGGATTACCGGCAGGAATTGTCCTGGGATTCACATTTGGATTTGGAGTAGAGGGTATTTGGTCAGGGATGATTGGAGGCATATTTTTGCAGACAGTAATCCTTATAGTGGTCACTTCAATAACAAACTGGAAAAAAGAGGCTGAAGAAGCAGAGAGCCGCGTGAGGAAGTGGGGAGGATCAATTGCGTATGATAAATGA 1194 0.4347 MLGMGSALETLCGQAYGAGQIRMLGVYMQRSWVILLTTAILLVPVYVWSPPILELIGQTNQISVAAGKFAVWMIPQLFAYALNFPIQKFLQAQRKVLVMLWISAVVLVLHTIFSWLLILKLGWGLTGAAITLNTSWWLIVIAQLLYIFITKSEGAWSGFTWLAFADLFAFVKLSLASAVMLCLEFWYLMILVVITGRLKNPLVPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGAGDFRAARFSVLVVSITSVSIGVVAMIIVLATRDYFPYLFTSSIAVAEETTKLAVLLGVTVVLNSLQPVLSGVAVGAGWQSLVAYINIGCYYVVGLPAGIVLGFTFGFGVEGIWSGMIGGIFLQTVILIVVTSITNWKKEAEEAESRVRKWGGSIAYDK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0473 397 PANTHER PROTEIN DETOXIFICATION 33 1 383 - -
Apr9g0473 397 CDD MATE_eukaryotic 1 381 IPR045069 GO:0042910|GO:1990961
Apr9g0473 397 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 383 - -
Apr9g0473 397 Pfam MatE 177 337 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr9g0473 397 Pfam MatE 1 116 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr9g0473 397 TIGRFAM matE: MATE efflux family protein 1 352 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0473 Apr-Chr9 6631528 6636546 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0473 9 6631528 6636546 Apr9g0473 9 6631528 6636546 ECH