Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0469 ATGGCGAAAACGGGTGCCGACGACGGCGAGCTCCGCCGAGCTTGCGAAGCCGCAATCGAGGACCATAAGCAGAAGATCGTGATGGCGCTCCGCGTCTCCAAGAGCCACGGGATCTTGGGAAAATCTTCCAAGCTTGGTCGTCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTCCACAAAATCGAAAGGTCAGAGTACAACGGCTTTTCTTCGGGTTTTGAAGTATTCTACTGGAGGAGTGCTTGAACCTGCAAAACTATACAAGCTGAAGCACCTCTCGAAAGTGGAAGTTATAACAAATGATCCCAGTGGATGTACATTTACACTGGGATTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCTCAATGGACAATGCGCAACATTGATGACAGGAATCGCCTCCTTCTCTGCATCTTGAACATCTGCAAAGATGTTTTGGGTCGCCTTCCAAAGGTCGTTGGTATAGATGTCGTAGAGATGGCTCTTTGGGCTAAGGAAAATACACCCCCTGTTTCTACTCAAAGTAAGGTGCGAGATGGTGGTCCTGTTGCATCTGCTGTGACTGAGACAGAACTTAAGGTCAATGTTGAAAAGGAACTTGTCTCACAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAGGAGTTTTCTGAAAGGTTGAAGAGGGAGCTCCAGGCTCTGGAGGCAGCAAATGTGCATGCTATTTTAGAAAGTGAACCTTTGATGGATGAGGTTATGCAAGGGCTTGAAGCAGCAACCTATTGTGTGGAAGATATGGATGAGTGGTTAGGCATATTCAACGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACCCGCAATAACAACTTGGAAATGCAATCAGTAAATAACAAATCTCTCATTGAGGAGCTTGATAAGCTTCTTGAGCGATTGCGTGTCCCTTCTGAGTATGCAGCATGTTTGACGGGGGGTTCATTTGATGAAGCTCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGGCCAATGCCTTGCGTGGTCTTGAAGTGCCTAATTTAGACCCAAGTTATGCAAACATGAGAGCCGTTAAAGAGAAACGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCTTCTGAATTCTTGAGAAATTACTTTGCTAGTTTGGTGGACTTCATGATTAGTGATAAAAGTTACTTTTCTCAGCGCGGACAATTAAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAACTGCCTGGGTCCGTTGAGAAAAGCTTATTGCAGTTCTTTAAACTTGCTTCTTCGTAGGGAGGCCCGTGAGTTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTTGAAGGTTCAACAGGTTCTGGTCAGAATGTAAATGCTACTGACACTTCTACTGTCTCTGATGCTTATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACACTTGTTCCTCCAGGGGGTATTGTTAATGGGAATAGAACTGGATATGATGATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGTAAATCTGGTAAAAATTCTTCAGAGCTTGCTGCTTTGAATGAATCACTTCAGGATTTGCTTGACGGAATTCAAGAAGACTTTTATGCTGTTGTGGATTGGGCATACAAGATTGATCCATTACGCTGTATATCAATGCATGGAATAACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCTGCAGGATTTGTACGCCTTTTGCTTGGTGACCTGGAGTCTCGGATTTCTTTGCAGTTCAACCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAACGCAATGTTCGCCAAATGGGTGTTCTATCCTACATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATACACAAAATTTGTAAGCATAATGTTTGCAACTTTGGAAAAAATTGCGCTAACAGATCCAAAGTATGCAGATATTTTTCTTTTTGAGAACTATGCTGCCTTTCAGAATAGTTTGTATGACCTTGCCAACATTGTACCCACTTTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGTACACGCCATATTAGCATGATTATCTACTATCAATTTGAACGCCTTTTTCAGTTTGCTCGAAGGAGTGAGGACTTGATGTTCACTGTTCCACCTGAAGAGATTCCTTTCCAGCTTGGACTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTTGACAAGTCCATTGCTGCGATGTACAAGAAACTGCAGAAGAATTTAACTTCAGAGGAATTGTTACCTTCCTTATGGGACAAATGCAAGAAGGAGTTTCTTGACAAGTACGAAAGTTTTGCCCAACTTGTGGCTAAGATTTACCCTACTGAGACAATCCCATCTGTAACAGAGATGAAAGACCTTTTAGCTTCCATGTAG 2652 0.4314 MAKTGADDGELRRACEAAIEDHKQKIVMALRVSKSHGILGKSSKLGRQMAKPRVLALSTKSKGQSTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVITNDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPPVSTQSKVRDGGPVASAVTETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHAILESEPLMDEVMQGLEAATYCVEDMDEWLGIFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYAACLTGGSFDEARMLQNVEACEWLANALRGLEVPNLDPSYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGIVNGNRTGYDDDDDLGIMDIDENDSKSGKNSSELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISLQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIALTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRSEDLMFTVPPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPTETIPSVTEMKDLLASM* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0469 883 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Apr9g0469 883 Coils Coil 188 208 - -
Apr9g0469 883 Coils Coil 221 248 - -
Apr9g0469 883 Pfam Exocyst complex component Sec3 575 866 IPR019160 GO:0000145|GO:0006887
Apr9g0469 883 Pfam Exocyst complex component Sec3 224 484 IPR019160 GO:0000145|GO:0006887
Apr9g0469 883 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Apr9g0469 883 Coils Coil 281 318 - -
Apr9g0469 883 PANTHER SEC3/SYNTAXIN-RELATED 1 883 - -
Apr9g0469 883 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0469 Apr-Chr9 6540863 6559853 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0469 9 6540863 6559853 Apr9g0469 9 6540863 6559853 ECH