LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g0452	ATGTTGTCAACAAAATTAATGTTGTGGTCACTGCTTTTGTCTGGGTGCTACTTTGCCATTTCATGCGATGCAAACCAACAGGGCGAATACCTCTATAAGTTTATTGAATCAAAGAGGTTTAAGAAGGCCTCACATGGAGGAGCTTCAATTGCTGAAGATGGTGGTGATGGTGTGGCCACATATTTTTCGAAGGTACATGTTGTTAAGGAACAATCTGGGTGGATGGAAGCAGATAAAGTGAAGGCTTTGCCGGGACAGCCAAAAGGGGTGGATTTTGATCAATATGCTGGCTATGTAACAGTGGATGCAAAGGCAGGGAGAGCACTGTTCTACTACTTTGTGGAGTCACCTCAAAATTCTTCCACCAAGCCTCTTGTTCTATGGCTAAATGGAGGGCCTGGCTGTTCTTCCTTTGGTTATGGAGCCATGGAAGAACTAGGACCTTTTAGAGTCAACAGTGATGGAAGAACACTGTACAGAAATGAATATGCATGGAACAACGTGGCAAACGTTATTTTCCTAGAGTCTCCAATAGGAGTTGGCTTTTCATATTCAAACACTTCTTCTGACTACATTAAAACTGGTGACAAAAGCACAGCCATGGACTCGTATATTTTTATTCTAAATTGGCTTGAGAGATTTCCACAGTACAAAACTCGAGACTTCTTCATAACTGGTGAAAGCTATGCTGGCCATTATGTTCCTCAGCTAGCTTACACTATTCTTACAAATAATAAGCTTACAAATCACACAGTGATCAACCTTAAAGGGATTGCGATCGGGAATGGCTGGATAGATGATAATACATGTACAAAGGGAATGTATGACTATTTTTGGACACATGCTCTAAACTCTGATGAGACCCATGAAGGAATTGAAAGACACTGTGACTATCAGAGCGGTAACTTTACAAGTGAATGCTACCAATATCAAAATAGAGGGATGGATGAAATAGGAAATATTGACGTATACAACCTATACGCTCCACATTGTGATTCAGCTGCAAGAAAAACCGGTGCTAGTCCTGCCACTTACTCGGGAAGCAATTTCGACCCTTGTTCTGAAGATTATACCAGTTCCTACTTAAATCTCGCTGAAGTACAACAGGCTCTTCATGTTAAAGCATTAAAATGGTCTGCTTGCAGTGGGGTGGGATGGACAGATAGCCCAGCAACAGTTCTACCCGTTATAAAGCGGTTAATATCAAGTGGTATAAGGACATGGATCTATAGTGGCGATACAGATGGGCGTGTTCCCATAACATCGTCTCGGTATTCAGTAAATTCCTTGAAACTTCCGGAGAAGACTACATGGCGTCCATGGTACTCTGGCAATGAGGTTGGAGGATACGTGGTTGGGTACAAAGGGCTCACGCTCGTCAGTGTACGGGGAGCTGGGCACATGGTTCCAAGTTTCCAACCACAACGAGCACTAACCATGATCACATTTTTTCTTCGTGGAGAACTTCCTCCTAAATTAACCCCTTAG	1488	0.4267	MLSTKLMLWSLLLSGCYFAISCDANQQGEYLYKFIESKRFKKASHGGASIAEDGGDGVATYFSKVHVVKEQSGWMEADKVKALPGQPKGVDFDQYAGYVTVDAKAGRALFYYFVESPQNSSTKPLVLWLNGGPGCSSFGYGAMEELGPFRVNSDGRTLYRNEYAWNNVANVIFLESPIGVGFSYSNTSSDYIKTGDKSTAMDSYIFILNWLERFPQYKTRDFFITGESYAGHYVPQLAYTILTNNKLTNHTVINLKGIAIGNGWIDDNTCTKGMYDYFWTHALNSDETHEGIERHCDYQSGNFTSECYQYQNRGMDEIGNIDVYNLYAPHCDSAARKTGASPATYSGSNFDPCSEDYTSSYLNLAEVQQALHVKALKWSACSGVGWTDSPATVLPVIKRLISSGIRTWIYSGDTDGRVPITSSRYSVNSLKLPEKTTWRPWYSGNEVGGYVVGYKGLTLVSVRGAGHMVPSFQPQRALTMITFFLRGELPPKLTP*	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g0452	495	ProSitePatterns	Serine carboxypeptidases, histidine active site.	457	474	IPR033124	GO:0004185
	Apr9g0452	495	Pfam	Serine carboxypeptidase	84	486	IPR001563	GO:0004185\|GO:0006508
	Apr9g0452	495	PRINTS	Carboxypeptidase C serine protease (S10) family signature	161	173	IPR001563	GO:0004185\|GO:0006508
	Apr9g0452	495	PRINTS	Carboxypeptidase C serine protease (S10) family signature	174	184	IPR001563	GO:0004185\|GO:0006508
	Apr9g0452	495	PRINTS	Carboxypeptidase C serine protease (S10) family signature	210	235	IPR001563	GO:0004185\|GO:0006508
	Apr9g0452	495	PRINTS	Carboxypeptidase C serine protease (S10) family signature	457	470	IPR001563	GO:0004185\|GO:0006508
	Apr9g0452	495	Gene3D	-	353	384	-	-
	Apr9g0452	495	ProSitePatterns	Serine carboxypeptidases, serine active site.	224	231	IPR018202	GO:0004185
	Apr9g0452	495	Gene3D	-	393	487	-	-
	Apr9g0452	495	PANTHER	CARBOXYPEPTIDASE	21	492	-	-
	Apr9g0452	495	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	21	492	IPR001563	GO:0004185\|GO:0006508
	Apr9g0452	495	Gene3D	alpha/beta hydrolase	73	341	IPR029058	-
	Apr9g0452	495	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	16	-	-
	Apr9g0452	495	SUPERFAMILY	alpha/beta-Hydrolases	80	488	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g0452	Apr-Chr9	6284749	6289783	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g0452	361	488	Calmodulin-binding Proteins	AT2G22960	28.571	6.37e-13	65.5

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g0452	9	6284749	6289783	Apr9g0452	9	6284749	6289783	ECH