Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0444 ATGGAAGCAACAACGGAAGCATTCGTACCTTCAAGAACAATCGATGATGAACGCCTAGTTACCGTTCTCAGCATTGATGGGGGCGGCATTAGGGGCATCATACCAGGAATCATACTAGATTTCCTTGAAACAGAGCTTCAGAAGTTGGATGGTGATCATGTAAGATTGGCAGATTACTTTGACGTGATTGCGGGAACAAGTACTGGGGGATTAGTGGCTGCAATGCTCACTGCCCCAAATGAGCATAACCGACCATTATTTGCAGCCAGTGAAATCAAAGATTTCTACCTTAAGCATGGCTCAAAAATATTCCCACAAAATAAATGCTGCAATTTATTCTTACATATCGTGAAGCTCAGCAAAGCTCTATTAGGACCCCGGTATAATGGCAAGTATTTGCATAGACTTCTAAAGGAAAGACTAGGAGACACAAAATTACACCAAACACTGACCAACGTTGTCATCCCAGCATTTAACATCAAATGCCTTCAACCAACCATCTTTTCCACTTTCCAGCTGAAGAAAAGGCCAGATTTGAATGCCTCGCTATCGGACATATGCATTGCAACTTCGGCAGCTCCAACATATCTTCCACCTCATTACTTTGAAACCAAAGATCACACTGGAAAAGTCATAGGCAAATTCGATCTTGTGGATGGAGGGGTCGCGGCAAATAACCCAACCATGGTTGCCATAGGGGAAGTGACAAACCAAATTAATCATGATGGACCAAGCGCAAAAATAAATGTAGAACCAATACAATATGACCAGTTTTTGGTGATATCGTTGGGAACAGGAGCTCAAAAACAGGAAGTGAGATACACTGCAGATGAAGCAGCTCAATGGGGCATTTTGAGTTGGGTAGCCACAATGAATGGTTGCACCCCTTTGATTGATGCTTTTATGCAAGCAAGTGCTGACATGGTTGACTTTCAGCTTGCCTCCGTTTTCGGAACACACAATTCCGAAAACAATTACCTGCGAATCCAGGACGACACATTAACTGGGGACTTATCTTCGGTAGATGTGGCCACCGAGAAGAATTTGAAAGATCTCGTGAAAGTTGGGCAATCATTGTTAAAGAAACCAGTTTCGAAGGTTAACTTGAAGACTGGCATTTACGAACCTGCAACCCATTATTATGAAACAAACGAGGAAGCCCTGAAGAGGTATGCAAAAAGACTATCTAAACAGAAGCAAATTCGTAATCTGGGAAAGTCTGATAAGAAATTATAG 1236 0.4231 MEATTEAFVPSRTIDDERLVTVLSIDGGGIRGIIPGIILDFLETELQKLDGDHVRLADYFDVIAGTSTGGLVAAMLTAPNEHNRPLFAASEIKDFYLKHGSKIFPQNKCCNLFLHIVKLSKALLGPRYNGKYLHRLLKERLGDTKLHQTLTNVVIPAFNIKCLQPTIFSTFQLKKRPDLNASLSDICIATSAAPTYLPPHYFETKDHTGKVIGKFDLVDGGVAANNPTMVAIGEVTNQINHDGPSAKINVEPIQYDQFLVISLGTGAQKQEVRYTADEAAQWGILSWVATMNGCTPLIDAFMQASADMVDFQLASVFGTHNSENNYLRIQDDTLTGDLSSVDVATEKNLKDLVKVGQSLLKKPVSKVNLKTGIYEPATHYYETNEEALKRYAKRLSKQKQIRNLGKSDKKL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0444 411 Gene3D Cytosolic phospholipase A2 catalytic domain 11 407 - -
Apr9g0444 411 PANTHER PATATIN 12 403 - -
Apr9g0444 411 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 232 IPR002641 GO:0006629
Apr9g0444 411 Pfam Patatin-like phospholipase 23 232 IPR002641 GO:0006629
Apr9g0444 411 PANTHER XYLOSE ISOMERASE 12 403 - -
Apr9g0444 411 SUPERFAMILY FabD/lysophospholipase-like 19 375 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0444 Apr-Chr9 6209233 6212811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0444 19 404 Miscellaneous Gene Families AT2G26560 61.140 3.56e-162 460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0444 9 6209233 6212811 Apr9g0444 9 6209233 6212811 ECH
Apr9g0444 9 6209233 6212811 Apr5g1534 5 19225092 19227250 PCT