Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0434 ATGGCTGCTAGGAGCGAACACCAAACGGTTCCTCTTTCGGTGCTCCTGAAGCGTGAATTGGCGAATGAGAAAATTGAGAAACCTGAGATTCTTCATGGTCAAGCGTGTCAGAGCAAGAAAGGGGAGGATTTCACTCTGCTCAAGACGGAATGCCAGAGGGTGGTGGGGGATGGAGTCTCTACATATTCCGTTTTTGGGCTATTTGATGGACACAATGGAACTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAATAATGTTTTAAGTGCGATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCTAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGACAAAGATTTTCAACAGAAAGGACAAAAATCAGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGTTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAATCTTCTGAAGGTGTGCTGTATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAGGAGAGGGTGCGCATCACCTCTAGTGGGGGTGAGGTTGGTCGGCTAAATACCGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTCTCACGATCTATCGGAGATATGGACATTGGTGAATTTATTGTCCCTGTACCGTATGTAAAGCAAGTGAAGCTGTCCACTGGTGGAGGCCGGCTTGTAATCTGCAGTGATGGTGTTTGGGATGCTCTGCTTGCAGAAGTGGCCCTTGATTGTTGTCGTGGAATGTCAGCAGAGGCTGCTGCACCACATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACTTGCATTGTTGTTGATATATTACCTCAGGAGAAGCCACCTGTTTCTGTGCCACAACCAAAGAAGCCAGTAAAGGGAATGCTCAAGTCCATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTAATATTGACAAGGAATGCTTGGAGCCAGATGTAGTGGAGGAATTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATAGTAAATATCCTATCTGCAACATGTTCAAGCTGTTTATGTGTGCGGTATGTCAAGTAGAGATAAAACCTGGAGAGGGCATTTCAATACACGAGGGTGCACCCAACTCCCGAAAAGTTCGTCCTTGGGATGGACCTTTCCTTTGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATCAGGTAGACTTAGCAGTGGAAGTGACGAATGA 1287 0.4499 MAARSEHQTVPLSVLLKRELANEKIEKPEILHGQACQSKKGEDFTLLKTECQRVVGDGVSTYSVFGLFDGHNGTAAAIYAKENLLNNVLSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQQKGQKSGTTVTFVIIEGWFVTVASVGDSRCILESSEGVLYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTGGGRLVICSDGVWDALLAEVALDCCRGMSAEAAAPHIVKEAVQAKGLRDDTTCIVVDILPQEKPPVSVPQPKKPVKGMLKSMFRKKSSESSSNIDKECLEPDVVEELYEEGSAMLSERLDSKYPICNMFKLFMCAVCQVEIKPGEGISIHEGAPNSRKVRPWDGPFLCLSCQEKKEAMEGKRSSGRLSSGSDE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0434 428 CDD PP2Cc 39 293 IPR001932 -
Apr9g0434 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Apr9g0434 428 MobiDBLite consensus disorder prediction 409 428 - -
Apr9g0434 428 Gene3D - 32 299 IPR036457 -
Apr9g0434 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 423 - -
Apr9g0434 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Apr9g0434 428 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Apr9g0434 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Apr9g0434 428 SMART PP2C_4 21 291 IPR001932 -
Apr9g0434 428 Pfam Protein phosphatase 2C 53 277 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0434 Apr-Chr9 6060238 6066173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0434 1 427 PP2C-type Phosphatase Gene Family AT1G47380 79.907 0.0 721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0434 9 6060238 6066173 Apr9g0434 9 6060238 6066173 ECH
Apr9g0434 9 6060238 6066173 Apr5g1527 5 19187166 19191195 PCT