Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0432 ATGGAAGCGGTGGGAAGGCTCGGAAGCTACATCACGCGCGGCGTCTACACCGTTTCAGGGCCGTTTCTTCCATTCGGTGGCGCTGTGGACATTGTTGTTGTTCAGCAGAAAGATGGTTCCTTCAAGTCCTCTCCTTGGTACGTTAGATTTGGAAAGTTCCACAGGGGTTTTAGCTTTAAGGAAAATGTCAAGGTTAATATCAGCGTTAATGGACTCGAATCTGATTTTCACATGTATTTGAACCGTAAAGGGGAAGCTTCTTTTTTTCATGCCCAAGAACAAGAACAAGAGGGGGAATCTGTGTTTAATTATCCATCTTCTGGTGATGAAATTGAAACCAATGATGTCCAACCAAGGGGTAATAAGAGGCATTTCAAGTCCAATAGTTGTAATTTTGATTCAGACAAGTCATTTTCAGAGGCTAATGTTGATAAGGTTGTGGTGGGTAGGACTAGTTCTCGCCGCTCAAGAATTCTTGGGCTTGTGTTTGGGCCAAGGCCTTTGAAAGGGGAAGGTGAAGATGGTGATGTGAATGGGGTGGATTCTTTGGAGCATGCTGAGATTGCAGCCAAGTTGTTGGAGCTTAAATGGTCTACCAATCTTACCTATGATAAAATGCCTCCTAGAGACAGGAAAAAAACTAGAGGTCAAATGAAGGAGGAAGCTTATTCTTTCAGTGAACAAAATAAGATCAGTTCCAAGGTTACACAAACTGAGGAATTCACTAAGAATTTTGATCCTGGAAGGCCAGTATTGGAGGTATCTGAGTTGCATTCTCAGCAAAGAGATTGTTCCAATTCTGGTATGCGTGATGCCAAAGATGTTGGAAACACACCAATGTTTCGAAAATCTCAAACTGTGAATATTGATAGAAGACGTTGTTCAGTTAAGAATAGTGCAAATACTCCTACGTCTGAACAGCTAGCATCCTTGAATCTGAAGGAAGGGAGGAACACAGTAACCTTCAGGTTCTCTACAGATATGCTGGGGAAGCAGCAGATTGATGCTCGGATATATTTGTGGAAATGGAACACTCGTATAATGGTATCAGATGTAGATGGAACAATTACACGGTCAGATGTTCTAGGTCAATTCATGCCTTTAGTCGGAATCGACTGGTCACAGACAGGGGTTGCTCATTTATTCTCAGATATCAAGGAAAATGGTTACCAGCTACTTTTTCTCAGTGCTCGTGCAATTTCTCAGGCCTATCACACAAGACAGTTTCTATGCAACCTAAAACAGGATGGGAAAGTTCTACCAGATGGTCCTGTTGTTATTTCTCCTGATGGACTTTTTCCTTCTCTATACCGAGAAGTTATCCGAAGGGCTCCTCACGAGTTCAAAATTGGATGTTTAGAGGACATCAGGGCACTTTTTCCTCCTGATTGCAAACCCTTCTATGCCGGTTTTGGAAATAGGGATACTGATGAAATCAGCTACCTTAGGGTTGGAATCCCAAAAGGAAAAATATTCATCATTAATCCCAGGGGAGAAATTGCCGTAAACCGTAGTCTTGACACAAAATCATATACTTCTTTGCATGCTCTCGTGCATGGAATGTTCCCCCCTACAAATTCATCTGAACAGGAGGATTTTAATTCATGGAATTACTGGAAGTTACCTTCCGCTATAAATATTTGA 1644 0.4191 MEAVGRLGSYITRGVYTVSGPFLPFGGAVDIVVVQQKDGSFKSSPWYVRFGKFHRGFSFKENVKVNISVNGLESDFHMYLNRKGEASFFHAQEQEQEGESVFNYPSSGDEIETNDVQPRGNKRHFKSNSCNFDSDKSFSEANVDKVVVGRTSSRRSRILGLVFGPRPLKGEGEDGDVNGVDSLEHAEIAAKLLELKWSTNLTYDKMPPRDRKKTRGQMKEEAYSFSEQNKISSKVTQTEEFTKNFDPGRPVLEVSELHSQQRDCSNSGMRDAKDVGNTPMFRKSQTVNIDRRRCSVKNSANTPTSEQLASLNLKEGRNTVTFRFSTDMLGKQQIDARIYLWKWNTRIMVSDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSDIKENGYQLLFLSARAISQAYHTRQFLCNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRAPHEFKIGCLEDIRALFPPDCKPFYAGFGNRDTDEISYLRVGIPKGKIFIINPRGEIAVNRSLDTKSYTSLHALVHGMFPPTNSSEQEDFNSWNYWKLPSAINI* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0432 547 SUPERFAMILY HAD-like 339 490 IPR036412 -
Apr9g0432 547 SMART lns2 347 503 IPR031315 -
Apr9g0432 547 Pfam LNS2 (Lipin/Ned1/Smp2) 302 523 IPR013209 -
Apr9g0432 547 PANTHER GH19076P 286 544 - -
Apr9g0432 547 PANTHER GH19076P 1 273 - -
Apr9g0432 547 PANTHER LIPIN 1 273 IPR026058 -
Apr9g0432 547 PANTHER LIPIN 286 544 IPR026058 -
Apr9g0432 547 Pfam lipin, N-terminal conserved region 1 97 IPR007651 -
Apr9g0432 547 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0432 Apr-Chr9 6036460 6041811 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0432 9 6036460 6041811 Apr9g0432 9 6036460 6041811 ECH
Apr9g0432 9 6036460 6041811 Apr5g1525 5 19167804 19176384 PCT