Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0406 ATGGAAGACAGAGATTATCTTTGTTCGAAGAATCCAACAACAATCACAAGCAGCAGAAGAAGGAGAAGCCGAAGCCCCACATCGAAGCAACAGCAAGAGAAACCAATGAAACCATACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTTGCGGAGATAAGAGAACCCAACAAGAGATCAAGGATTTGGTTGGGTTCTTATACGACACCCGTTGCAGCGGCACGCGCATACGACACCGCCGTTTTCTACCTGCGAGGCCCTTCCGCGCGCCTTAACTTCCCCGACTTGTTGTTCCAAGACCAAGAGGGCAATGATTCGGTGCAGCAAGGTGCAGGGAACATGTCCGCTGATTCCATACGCGAAAAAGCTACTCAAGTTGGCGCTAGGGTCGATGCTCTTGAAACGGCTCTTCATCATGCTTCTTCCCACACCACCTCCACCACTCTCAAACCTGACTTGAACGAGTTTCCAAAACTCGAAGATTCCCTTGACCTTCAGGATTGA 507 0.501 MEDRDYLCSKNPTTITSSRRRRSRSPTSKQQQEKPMKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLLFQDQEGNDSVQQGAGNMSADSIREKATQVGARVDALETALHHASSHTTSTTLKPDLNEFPKLEDSLDLQD* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0406 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 17 163 - -
Apr9g0406 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 17 163 - -
Apr9g0406 168 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Apr9g0406 168 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Apr9g0406 168 Pfam AP2 domain 39 87 IPR001471 GO:0003700|GO:0006355
Apr9g0406 168 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Apr9g0406 168 PRINTS Ethylene responsive element binding protein signature 77 97 IPR001471 GO:0003700|GO:0006355
Apr9g0406 168 SUPERFAMILY DNA-binding domain 38 96 IPR016177 GO:0003677
Apr9g0406 168 CDD AP2 39 97 IPR001471 GO:0003700|GO:0006355
Apr9g0406 168 MobiDBLite consensus disorder prediction 1 39 - -
Apr9g0406 168 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0406 Apr-Chr9 5600092 5602492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0406 17 146 AP2-EREBP Transcription Factor Family AT1G46768 60.741 8.61e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr9g0406 AP2 2.8e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0406 9 5600092 5602492 Apr9g0406 9 5600092 5602492 ECH