Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0404 ATGGGTCAATGGATACATGTGGCTGTGGTAGCAGCCTCAGTGGGATGTGTTTCAACCCTTTTGTTGGTTTTTTTGTGGCGTTTGTGTCATCACAGAAAACATAATCACAGAAACTTTGTTGAACCCAATAGTTTGACCAGAATGGATAGTCTTCAAGCTGGAATTGCAAGGCTTCATCACCAACCTACAATCTATCAACAATTTGATCAGAAGAACAAGAAAAAAGGCAATTTGTATGTGTTTCATAATGGGGTCTCTGGAAGAAAACATCTATTTAATTGGGCTGATCATCCATACCTTGCTGCTGATGCTGTAGAAAATGGTTGGTGTAGATTTGCTTTTACTAACTACAAGAGCAACATGCCAACTCCTTCAAAGAAATCAACCCTTTTAGGAGTGTGTGCTGCTGGTGAATATGGAAGAGAATCTGAGGCTGAGATAAGCTGGGAAGTGTGTCAGGGATCAGCTGAATATGTGCAGAAGATTAGGCTCAATCCTGGGTTGAAAAGGGTTCTTCACACAAACAACTCTTCCATGAGTGTTGCTTCTGTCATTAGGACTGCTCTGCCACTACCTGGCCCTCCTTTGGGAAACTATGCCTTCCCACAAGAGGCCTATTTTGAAATCACCATATTGTGCTATCTTGCTAATGATCATGAATTGGTTGGAAAGAGAGAAGGGGAGAAGACAAAACTGCTCATTGAAGATAGTTCAAATGGAAAAGGTGATTTGGGCATAGTTGAAGAAACAAAACTTGGTAAAGAGGGTAGTGGAAAGAGTGGATCTGTAATGTTTTCATTGGGGTTGACAGCAGGAGGGGCTGTTCCTTTGAGAGTTCCAGGGAGCTACCCTAGGAGCATTGGGTTCAATTCCAATGGTTCTGTCTTTCTTGAAGGAATGAAACTTGTGTTGGAGTCAGAGAAGGCACAATGGGTAGGAGCTGATAGGGTAGTTGGGTGTGGGTATGATCCAAGGCAGAAAAAGGTTTTCTTCACTTTGGACTCAGAATTGGTGCATGTGATCCACTGCCAATCAGAGGAATTTGGCACTCCACTTTGTCCAACGCTGGCTGCAAACGTAGACATTGTGGTTTTAGTTAATTTTGGACAAAGTGCATTCAAATACGCACCTGCAAATGCACAAAGAACACCAAATCCATGTTTCATAGCCCCACTTGTAAACTCCCCTGCTGCTACCATTGGTTATGATGACAGCAAGGAGTTGTTCTCAATGGGAAGGATTGATTCTCAGTGGCTTAATCGATCTGCAATAAAAGGAAACCACAACAATGGGACTAATAATAACCATGCCTTCGATTTTGATGAGGAGTCTGAGGCTGATCTATTTGAAATAGTCTTGGATGGTTCAGAAAAATCTCCACACACACTTTCATAG 1395 0.4229 MGQWIHVAVVAASVGCVSTLLLVFLWRLCHHRKHNHRNFVEPNSLTRMDSLQAGIARLHHQPTIYQQFDQKNKKKGNLYVFHNGVSGRKHLFNWADHPYLAADAVENGWCRFAFTNYKSNMPTPSKKSTLLGVCAAGEYGRESEAEISWEVCQGSAEYVQKIRLNPGLKRVLHTNNSSMSVASVIRTALPLPGPPLGNYAFPQEAYFEITILCYLANDHELVGKREGEKTKLLIEDSSNGKGDLGIVEETKLGKEGSGKSGSVMFSLGLTAGGAVPLRVPGSYPRSIGFNSNGSVFLEGMKLVLESEKAQWVGADRVVGCGYDPRQKKVFFTLDSELVHVIHCQSEEFGTPLCPTLAANVDIVVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATIGYDDSKELFSMGRIDSQWLNRSAIKGNHNNGTNNNHAFDFDEESEADLFEIVLDGSEKSPHTLS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0404 464 Gene3D - 142 383 IPR043136 -
Apr9g0404 464 PANTHER RAN BINDING PROTEIN 9-RELATED 2 460 - -
Apr9g0404 464 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 460 - -
Apr9g0404 464 SUPERFAMILY Concanavalin A-like lectins/glucanases 277 375 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0404 Apr-Chr9 5577041 5579242 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0404 9 5577041 5579242 Apr9g0404 9 5577041 5579242 ECH
Apr9g0404 9 5577041 5579242 Apr5g1499 5 18958267 18960749 PCT