Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0402 ATGGTGGAAGCAGGGGAAGATTGTTGCGTGAAGGTTGCGGTCCACGTGCGACCGCTCATTAGCGAGGAGAAGGTTCAAGGATGCAAGGATTGTGTAACCGTCGTTCCTGGAAAGCCTCAGGTACAAATTGGTGCCCATTCCTTCACATTTGATCATGTCTATGGGAGCACCGGTTCTCCCTCATCTGCCATGTTTGATGAATGTGTTGCTTCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGCACTGGCTTTAAAGATGGTTGCCAAGAGGGAATAATACCCCAAGTTATGAGTGTCTTGTTTAACAAAATTGAGAACTTAAAGCATCAGATTGAATTTCAGTTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGACCCATCCTCTATGAACAAACCAGAAACTGCAAATGGACATGCAGGGAAAGTGACTATTCCAGGGAAACCACCAATACAAATTCGTGAGACATCAAATGGTGTCATTACTCTAGCAGGATCTACTGAAGTCAGTGTTACAACACTAAAAGAAATGGCTGCTTGCCTAGAACAGGGATCATTGAGTAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCTCATGCCATCTTCACTATCACGTTAGAGCAAATGCGGAAGCTCAATAACCCTAGCGAGATCAGTTTAAATGATACCATGAATGACGAATATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGATCTGATGGCCTGCGTTTTAAGGAAGGAGTTCACATCAACAAAGGCCTTCTAGCACTCGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGAGAAAAGAAGGCGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCTCTTGGCGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCCGAGGAAACCCTTAACACTTTGAAGTATGCAAATCGTGCACGCAACATCCAAAATAAGCCTGTTGTCAATAGAGATCCAATGTCTAATGAGATGATAAAAATGCGACAACAACTTGAGTATTTGCAAGCAGAACTTTGTGCTCGTTCTGGTGGCTCTTTTGAGGAAGTTCAGGTCCTCAAGGAAAGGATTTCTTGGCTTGAAGCAGCTAATGAGGATCTTTGCCGTGAACTTCATGAATACCGTAGCAGATGCTCTATCGTAGAACAATGTGAAAAGGATGCTTATGATGGTAGCCCATGTAATGTAAAGACTGAGGGGCTTAAGAGGGGCTTACCTATCACAGCCTCTGACTATCCAATGAGTGAAACAACAGGGGATTCAAGAGAAATCGAAGAAGTTGAAAAAGAGTGGGAGCATACTCTTCTGCAAAATAGTATGGATAGGGAGTTACATGAATTGAATAAACGCTTGGAACAAAAAGAGTCTGAGATGAAGCTTTTTGGAATGTCTGATGCTGAAGCACTCAAGCAGCACTTTGGAAGGAAGATAATGGAACTGGAGGACGAGAAGAGAGCTGTGCAGCGAGAGAGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCAGCCAATTCTGATGGACAAACACAGAAATCAGAGGATATCCATGCCCAAAAATTGAAAGGACTTGAAGCCCAGATTATGGATCTTAAGAAGAAACAGGAGAGCCAGGTCCAGCTTCTGAAGCAAAAGCAAAAGAGTGATGAAGCAGCAAAGCGATTGCAAGATGAAATACAATCTATAAAGGCCCAAAAGGTTCAACTACAACAAAGGATAAAACAAGAGGCAGAACAGTTTCGGCAATGGAAGGCTTCTAGAGAGAAAGAGCTGCTGCAGTTAAAGAAGGAAGGAAGGAGAAACGAGTTTGAAAGGCATAAATTGCAAGCTTTAAATCAGCGACAGAAAATGGTCCTTCAGAGAAAGACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAGCCGAGACACTTCAGTTGCAATGAATGGAAGTGGAACGAATGGACAGAGCAATGAGAAGTCCCTACAACGGTGGCTTGATCATGAGCTGGAAGTCATGGTAAAAGAGCACGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCCCTTGCAGATGAGTTAGCCTTGCTAAAGCAAGTAAATGAGTTTGCTGCCAAGGGTCTCAGTTCTCCAAGAGGAAAGAATGGATTTGCTAGAGCATCGTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTCGAGAGCATGCTGAGCATATCATCCAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGTGCCTTCACTAATCGTGGACGCTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTACTTCAATATATGTTCAATTCTGTTGCTGATGCTAGGTGCCAACTGTGGGAGAAGGACACCGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGTCTACTACGGCAAAGTGAAATTAAGAGAAAGGAAGCTGAAAAGGAACTAAAAGTGAGAGAGCAAGCTGTTGCAACCACATTGGCTACGCCAACCTCTGTAAATTCTCCAAATTCGTTGAAACATTATGCGGAAGATATCAAGGAACCATCGTCTCCAGAGTCTTTGCCAGTACAGAAACAGCGCAAATTTACACCAGGTATTGCTAATGGCCGAGTGAGGGAATCAGCAGCATTTATAGATCAGAGTAGAAGGATGATACCCATTGGGCAACTGCCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGCAAGTTATGGAGATGGAAAAGAAGCCACCATCAGTGGCTAGTACAATTCAAATGGAAGTGGCAGAAACCATGGAGACTTTCTGAATTGATTCGACATAGTGATGAGACAATCATGAGAACAAGGCCACGATCACAAGCTTTGCCACATATCATGTGA 3090 0.4317 MVEAGEDCCVKVAVHVRPLISEEKVQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGSTGSPSSAMFDECVASLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQEGIIPQVMSVLFNKIENLKHQIEFQLHVSFIEILKEEVRDLLDPSSMNKPETANGHAGKVTIPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNNPSEISLNDTMNDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMIKMRQQLEYLQAELCARSGGSFEEVQVLKERISWLEAANEDLCRELHEYRSRCSIVEQCEKDAYDGSPCNVKTEGLKRGLPITASDYPMSETTGDSREIEEVEKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGMSDAEALKQHFGRKIMELEDEKRAVQRERDRLLAEVENLAANSDGQTQKSEDIHAQKLKGLEAQIMDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSSRDTSVAMNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALADELALLKQVNEFAAKGLSSPRGKNGFARASSMSPNARMARIASLESMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDTEIREMKDQIKELVGLLRQSEIKRKEAEKELKVREQAVATTLATPTSVNSPNSLKHYAEDIKEPSSPESLPVQKQRKFTPGIANGRVRESAAFIDQSRRMIPIGQLPMKKLAIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSELIRHSDETIMRTRPRSQALPHIM* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0402 1029 SMART kinesin_4 7 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0402 1029 Gene3D Kinesin motor domain 2 392 IPR036961 -
Apr9g0402 1029 MobiDBLite consensus disorder prediction 692 716 - -
Apr9g0402 1029 ProSiteProfiles Kinesin motor domain profile. 9 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0402 1029 CDD KISc_KIF4 8 365 - -
Apr9g0402 1029 MobiDBLite consensus disorder prediction 156 175 - -
Apr9g0402 1029 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0402 1029 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0402 1029 PRINTS Kinesin heavy chain signature 260 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0402 1029 PRINTS Kinesin heavy chain signature 314 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0402 1029 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 1 1029 - -
Apr9g0402 1029 Coils Coil 672 692 - -
Apr9g0402 1029 Coils Coil 862 896 - -
Apr9g0402 1029 MobiDBLite consensus disorder prediction 696 716 - -
Apr9g0402 1029 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1029 - -
Apr9g0402 1029 ProSitePatterns Kinesin motor domain signature. 259 270 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr9g0402 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 395 IPR027417 -
Apr9g0402 1029 Coils Coil 404 424 - -
Apr9g0402 1029 Coils Coil 567 639 - -
Apr9g0402 1029 Coils Coil 517 558 - -
Apr9g0402 1029 Coils Coil 491 511 - -
Apr9g0402 1029 Pfam Kinesin motor domain 17 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0402 Apr-Chr9 5543327 5554776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0402 10 388 Calmodulin-binding Proteins AT5G65930 33.420 3.06e-54 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0402 9 5543327 5554776 Apr9g0402 9 5543327 5554776 ECH
Apr9g0402 9 5543327 5554776 Apr5g1498 5 18936975 18947930 PCT