Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0395 ATGGGCCAGGCAGCTTCCACGGCCACCGTCGTTTGCCGTCGCGAAAGCGCTCAAGGCAACCGCTCCGTCAACGCCTCCAAGACCAGATCCACCGCCTCGGTTACTCCGATGGTTGGTTATGGCGCCGGCGAGGACTACAACGGAAACCGTTGTGGCGAGGTTTTTACTGATGGAATCGCTGACTACATCTCCGATCTCCCGAACGAGTGCTTGGCTTCAGTGTTTCAGTTTCTCGGCTCCGCCGATCGGAACCGCTGCTCACTCGTTTGTCGGCGGTGGCTTCAGATCGAAGGACAGAGCCGTCACCGTCTTTCTCTGAACGCGCAAATAGAGCTTTTGCCGGCAATACCATCGCTTTTTTCTCGCTTCGATTCGGTGACAAAACTGGCGCTCAAGTGCGACCGCAGATCCGTGAGCATCAGAGACGAGGCGCTCGTGTTGATCTCCGAGCGGTGCCCTAACCTCACACGTCTCAAGCTCCGTGCGTGCCGCGAACTCACCGACGCAGGCATGGAGGCCTTCGCGAAGAACTGCAAGGGCTTGAAGAAGCTCTCGTGTGGATCGTGCACCTTCGGATCGAAAGGCATGAACGCGGTTCTGGACAACTGCGCCGCGCTCGAGGAACTCTCCGTCAAGCGCCTCCGTGGAATCACCGACGCAGCGGCGGCGGAGCCGATCGGTCCCGGAGTCGCGGCGTCGTCGCTCAAAACCGTTTGCTTGAAGGAGCTGTACAATGGACAGTGTTTCGGCACGTTGATTCTAGGAGCGAAGAATCTGAAAACCTTGAAGCTTTTTCGGTGCTCCGGCGATTGGGACAGGCTCTTTCAGCTCATGGCCGATCGTGTAACGAACGTGGTTGAGGTCCACCTCGAGAGGCTTCAGATTAGCGATGTTGGATTGCAAGCTATTGCCAATTATTCGAGCTTGGAAATTTTGCATCTCGTTAAGACACTTGAATGTTCTGATATTGGACTTGTTGCAATTGCAGAACGATGCAAGCTTCTAAGGAAGCTTCACATTGATGGGTGGAAAGCAAATCGTATTGGTGATGAAGGGTTAATAGCTGTTGCAAAGGGTTGCCCTAATTTACTTGAACTAGTGCTTATTGGGGTTAACCCCACTAAGTCAAGTTTGGAAATGTTGGCGTCTAATTGCCAGAATCTTGAGCGGTTGGCTTTGTGTGGAAGTGATACGGTTGGTGATCCTGAGATATCTTGCATTGCTGCAAAGTGTGTGGCTTTGAAGAAACTATGCATTAAGAGTTGTCCTGTTTCCGATAAAGGGATGGAAGCATTGGCTAGTGGGTGTCCCAATTTGGTTAAAGTGAAGGTTAAGAAGTGTAAGGCTGTTACCTCTGAGGGTGGAGATTGGTTGAGGAGGACTAGGGGTTCAGTTGCTGTTAATTTAGACACTGGCGAAACAGAGCTTCAGGAAGCGAGTGCTAGTGATGGAGGGGCACAAGACAATGGATTGGAGTTTCCTCCATTGCCTGCACAAATAGCAGCAGCATCTGCATCGGCTAGTATTGCGACATCGAGCAGTACTGCTCGGTCTAGTTCATTCAAGTCAAGATTAGGACTTTTGTCTGGGAGGAGTTTAGTGGCTAGCACTTTGAGAAGATGGTCGGGTGGTAGTACTAGTGCGCGCCATGGTTAG 1656 0.5193 MGQAASTATVVCRRESAQGNRSVNASKTRSTASVTPMVGYGAGEDYNGNRCGEVFTDGIADYISDLPNECLASVFQFLGSADRNRCSLVCRRWLQIEGQSRHRLSLNAQIELLPAIPSLFSRFDSVTKLALKCDRRSVSIRDEALVLISERCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGITDAAAAEPIGPGVAASSLKTVCLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRVTNVVEVHLERLQISDVGLQAIANYSSLEILHLVKTLECSDIGLVAIAERCKLLRKLHIDGWKANRIGDEGLIAVAKGCPNLLELVLIGVNPTKSSLEMLASNCQNLERLALCGSDTVGDPEISCIAAKCVALKKLCIKSCPVSDKGMEALASGCPNLVKVKVKKCKAVTSEGGDWLRRTRGSVAVNLDTGETELQEASASDGGAQDNGLEFPPLPAQIAAASASASIATSSSTARSSSFKSRLGLLSGRSLVASTLRRWSGGSTSARHG* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0395 551 Gene3D Ribonuclease Inhibitor 98 487 IPR032675 -
Apr9g0395 551 PANTHER UNCHARACTERIZED 46 472 - -
Apr9g0395 551 Pfam F-box domain 63 96 IPR001810 GO:0005515
Apr9g0395 551 PANTHER F-BOX PROTEIN SKIP2 46 472 - -
Apr9g0395 551 SMART LRR_CC_2 411 435 IPR006553 -
Apr9g0395 551 SMART LRR_CC_2 178 202 IPR006553 -
Apr9g0395 551 SMART LRR_CC_2 282 306 IPR006553 -
Apr9g0395 551 SMART LRR_CC_2 152 177 IPR006553 -
Apr9g0395 551 SMART LRR_CC_2 385 410 IPR006553 -
Apr9g0395 551 SMART LRR_CC_2 332 359 IPR006553 -
Apr9g0395 551 SMART LRR_CC_2 203 229 IPR006553 -
Apr9g0395 551 Gene3D - 62 97 - -
Apr9g0395 551 ProSiteProfiles F-box domain profile. 60 96 IPR001810 GO:0005515
Apr9g0395 551 SUPERFAMILY RNI-like 112 469 - -
Apr9g0395 551 SUPERFAMILY F-box domain 61 96 IPR036047 GO:0005515
Apr9g0395 551 SMART fbox_2 66 106 IPR001810 GO:0005515
Apr9g0395 551 Pfam Leucine Rich repeat 414 433 IPR001611 GO:0005515
Apr9g0395 551 Pfam Leucine Rich repeat 152 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0395 Apr-Chr9 5450512 5453460 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0395 9 5450512 5453460 Apr9g0395 9 5450512 5453460 ECH