Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0378 ATGGCTTCGAGTTTTGACCGGTGGGAAAAAGATCCATTTTTCAGGGCTGCCGAAGAAGTTCAGGAATCTGCAGATAGGATGGAATCTACATATAGGATATGGGTACACGCAACAAAAGATGCGTCCAGCATGTGGAACTCTGATGAACTGTGCCGAGATCTACATACTGCCTTTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAACGGGCAGTGAGGTCAAGTTATAGCAAAAGCTCAAGCGAGGAAGCACGAAATAGGCACAGAAATTTTATCACTGCCATTGATGATAAGATAATGAAAGTTGAGCATTTGTTAAATGAATCAATGCCTCCGAACAGCAAAGCATCTCTGCCTTGGTTGCGTTTAGATGAAGGAGAACAGAATGAGCTTGCTTTGTTTCTTTCAGGAATGCCAGCAGCTACGACTACCAATAACTCTTGGTCTAACAGCAGGGACATTGAAAGTCCACAATTAAGTGATCAAGTTTCGGCCAGAAATTATTCAAAGAATTTTGATGTTTCATCTCGGTGGGGTGAATCAGAGGAGGAGATATCCCATGGGCATCGTAGGGTAGCTAGTGCCAGTGCTGATATCAGTTCTTGGAAAATTTCAGTTTCTGATGATGCACAGCAATGGAGTTCTTCCAGCGGTTCTTCTGGTCCGATGCATAAGGTAGCCAGTTTATCAGGATTTCTTAGTTCCATGGAATCTGTCTCTAAGTTGAAGTGGCCTGGGAATGGTTATAGAAAGCTGAAAGTAGAAGATCCTCGTAAAGGAACTGATAGTGCACTACTTTCAACAGCTCAATTGAATAGGGGAAATGATGTATGCTACGATAGAAATAAGAGCAGCCTTGATAGCTGTGATAAATTCTATGACAAGCAACTCTATGGATGGTATGGTACTATTCAAAGGCAGCTTCAAAGATCTCAATACCAAATGCAATACCGTCAGCATGTCCGAATAATTGTTTGGATTGTTGTTCTCCTTTGCTTGATCGCTTTAATTGCATTTCGCGCAATGTAG 1029 0.4208 MASSFDRWEKDPFFRAAEEVQESADRMESTYRIWVHATKDASSMWNSDELCRDLHTAFGTAKWQLEEFERAVRSSYSKSSSEEARNRHRNFITAIDDKIMKVEHLLNESMPPNSKASLPWLRLDEGEQNELALFLSGMPAATTTNNSWSNSRDIESPQLSDQVSARNYSKNFDVSSRWGESEEEISHGHRRVASASADISSWKISVSDDAQQWSSSSGSSGPMHKVASLSGFLSSMESVSKLKWPGNGYRKLKVEDPRKGTDSALLSTAQLNRGNDVCYDRNKSSLDSCDKFYDKQLYGWYGTIQRQLQRSQYQMQYRQHVRIIVWIVVLLCLIALIAFRAM* 343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0378 342 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Apr9g0378 342 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Apr9g0378 342 Gene3D - 9 110 - -
Apr9g0378 342 PANTHER OS05G0443700 PROTEIN 1 340 - -
Apr9g0378 342 PANTHER EXPRESSED PROTEIN 1 340 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr9g0378 Apr-Chr9 5091121 5093868 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0378 9 5091121 5093868 Apr9g0378 9 5091121 5093868 ECH
Apr9g0378 9 5091121 5093868 Apr5g1473 5 18749551 18752394 PCT