Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0375 ATGGACCCGTCTATTGTGAAGCTTCTAGAAGATGACGAGGATGAAACAATGCACTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCCTTAAACAGAGATATAGGAGGAGATTTATCTGCTTCTCAGCTTTCTGGTTCTGACACAGTTTTGTCTCAAGGGAGCAATAATACATCAAGTCAATCTTTACCACAGTGGCCTACTTCTAGCCATGACAGCCGAACAGATATTCAAAATCAAGAATCTAAAACTACACAACAGCAAGAGCAACCTTCATCTGAGATGGAGCGGAAGCAACATGTTTCTTCTCAGGATGTAAATAATCCTCGTTTGTCACAGAAACAATCTCAAGATGAATGTCGTCAAGCACCAGCTGCACAAGTTTGCCCCCCAAATTCTCACGCTATTGGAATTCAGAATTCCGGAAAAGATCCTGTCCTTAATAATGAGGTAGTCAAAACTCATAATCCCAGCAGTGAATCTCAGTATGCGAAGTTGCAGCAGATAAGTAATCAACAAGCTACAGTCACTGAGCAGCCAAGTAGCCAAATAAATCATAGTAAAGGGGTACACTTTGCCCAGTTGCTACGCATCTTGACTCCTCAACTTGCCAAAGACAGGGCCATGCAGCTTGAAACCTTATTTGATAAGTTTAAGAAATATGAAATACCAAAAGACAGTTTTGTGCGACTTGTGAAAGGTATCGTAGGGGACCAGATGCTTAGATTAGCATTGGCAGAAGTGCAAATGCAATCACAGACAAGGCCCAATCCCTTGCCTGCTGGGCAGCGACACCCTGTAAGGATGCCAACTTTTAGTTCAGGTTCAAGACAATTGAATGATCCCCATGCTTTAGCGCAGATGCATCAGAGAAGTATGAATGCTGCTGTTGACCAATCCCGTATCACTTCTTTAGCTGGCCAAACCATGGAGAGCAGTACTAGAAAATCTCAGGAATTTGATGTTAAAATAGAATCTCAAGGATTGCAACCAAGCCAATTGTCATCTTCCAGTTCTAATGTTGTTGGTCAAGAAACAGAAAGATCATCAGTTCACATACAAGGGCTTAATAAACAACAGCAACAACATCTACATTTTTCATCAGCATATGGAAATAGTAGTGGTAACTATTACCCTTTTTCTGGGACAACTAGTATTTCCACTTCATCTATGAGACCACATCTTCATGATTCACATATGAGTCAATTTCCACATCAAAGTATTGGTTCAAATCACTTAGGTGGGGCAACGCAGGGTTTGAATGTAATTGGTATGCCAAAACTTGAACAGCAGAATTCTTTCAATGATCTGAAGAGACTGCCGGGTGGATCTGTGTCTTCTGCTGTTAACAATACTGCATCTCAACAAACTACAAATGCTTGGCAACCATCAACAAAAAAAGAACAAAATCTGGGATTGTTGTCATCTGGTTCTTATGTTAAAAAGGAACCTAGTGACTTGTCTACTGAGCAGCAACATAGGCATAATTTGTCTAAACTGCAAGGGATGGCTTCTGTTAATTCTCCACAGATTGAACAGGGTGGTACTAGTCAAGGAACTGTGAAGGATGAGTTTTCGAGAGGTCTTCCAGCATCCACAAGCTTGCCACCTACAACAGCTACTGGCTTGCTGCCACACAGTTCTGCTTCCCCTTCTGTAACGACCCAACTAGACCCTAGTGTCTCGCTATGCTCTCAGATGTCATCAAATGCTTCTGGAATTGTTGCAAGGACACCTCTTAAAAAGCCTGCTCTTGCCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTCCGAGTAAAAAACAAAAAACATCTGGAGGATCTACTGAACAAAGCATCGAACAGCTTAACGATGTCACTGCTGTTAGTGGAGTTGATCTTAGGGAAGAGGAAGAACATTTATTTTCAGGTCCCAAAGAAGAAAGTCGTGTGTCAGAAGCTTCTCGAAAAGCTGTGCAAGAAGAGGAGGAAAGGCTGATTTTGCAGAAAGTTCCATTGCAAAAAAAATTGATTGACATTATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGCGATGCTTGTCACTGTGTGTGGAGGAAAGGATGCGTGGACTGATAAGTGACCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACAAGACATCAGACTGTTGTCACCTCAGATGTTCAACAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAGTGGGAGAAAAAACAGGCTGAAGCAGAGAAGATTCGGAAACTTAATGATGTTGATGGCAATGCTGGAGTTGATGGTGACAAGGAGAAGGATGAGGGTCGTACTAAATTGATCAAGGTGAACAAGGAAGAGGATGACAAGATAAGGACAAATGCTGCAAATGTTGCTGCCCGTGCTGCTTATGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAGAAACGGGAAGGGGGGATGGACATATCATCTGGTTCTCAAACAGATAAAGATGTTAACCGCAAATCTTTACCAACATCTGGAAGAAGTATGAAGGATAATCAAGAAGGGGAGAATAAAAACCCAACCAATTTTGCAACTTCAGTGGCTGCTAGAAAACTTGGGATAAATCATGCCTTTGCACCTCAAACTAGGGTAGCTCGAAGCATCTCTGTTAAGGATGTGATTGCAGTTCTGGAGAGGGAATTCCAGATGTCTAAATCACCACTCATACATCGCTTGTATGAGAAAATTCATTCTGGTGCTACAGTTGAATAA 2781 0.4229 MDPSIVKLLEDDEDETMHSGVDVEAFQAALNRDIGGDLSASQLSGSDTVLSQGSNNTSSQSLPQWPTSSHDSRTDIQNQESKTTQQQEQPSSEMERKQHVSSQDVNNPRLSQKQSQDECRQAPAAQVCPPNSHAIGIQNSGKDPVLNNEVVKTHNPSSESQYAKLQQISNQQATVTEQPSSQINHSKGVHFAQLLRILTPQLAKDRAMQLETLFDKFKKYEIPKDSFVRLVKGIVGDQMLRLALAEVQMQSQTRPNPLPAGQRHPVRMPTFSSGSRQLNDPHALAQMHQRSMNAAVDQSRITSLAGQTMESSTRKSQEFDVKIESQGLQPSQLSSSSSNVVGQETERSSVHIQGLNKQQQQHLHFSSAYGNSSGNYYPFSGTTSISTSSMRPHLHDSHMSQFPHQSIGSNHLGGATQGLNVIGMPKLEQQNSFNDLKRLPGGSVSSAVNNTASQQTTNAWQPSTKKEQNLGLLSSGSYVKKEPSDLSTEQQHRHNLSKLQGMASVNSPQIEQGGTSQGTVKDEFSRGLPASTSLPPTTATGLLPHSSASPSVTTQLDPSVSLCSQMSSNASGIVARTPLKKPALAQKKPLEALGSSPPPPSKKQKTSGGSTEQSIEQLNDVTAVSGVDLREEEEHLFSGPKEESRVSEASRKAVQEEEERLILQKVPLQKKLIDIMAKCGLKGMSNDVERCLSLCVEERMRGLISDLIRISKQRVDFEKTRHQTVVTSDVQQQIMTINRKVREEWEKKQAEAEKIRKLNDVDGNAGVDGDKEKDEGRTKLIKVNKEEDDKIRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGMDISSGSQTDKDVNRKSLPTSGRSMKDNQEGENKNPTNFATSVAARKLGINHAFAPQTRVARSISVKDVIAVLEREFQMSKSPLIHRLYEKIHSGATVE* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0375 926 MobiDBLite consensus disorder prediction 599 615 - -
Apr9g0375 926 PANTHER IP01149P-RELATED 341 920 - -
Apr9g0375 926 PANTHER IP01149P-RELATED 39 344 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 434 556 - -
Apr9g0375 926 CDD TAF4 613 914 IPR007900 GO:0005669|GO:0006352
Apr9g0375 926 Pfam Transcription initiation factor TFIID component TAF4 family 618 914 IPR007900 GO:0005669|GO:0006352
Apr9g0375 926 MobiDBLite consensus disorder prediction 103 121 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 530 556 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 632 651 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 590 615 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 828 864 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 37 91 - -
Apr9g0375 926 ProSiteProfiles RST domain profile. 182 253 IPR022003 -
Apr9g0375 926 MobiDBLite consensus disorder prediction 322 347 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 305 347 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 493 522 - -
Apr9g0375 926 Pfam RCD1-SRO-TAF4 (RST) plant domain 185 248 IPR022003 -
Apr9g0375 926 MobiDBLite consensus disorder prediction 132 184 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 434 484 - -
Apr9g0375 926 Gene3D Histone, subunit A 663 708 IPR009072 GO:0046982
Apr9g0375 926 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 39 344 IPR045144 GO:0005669|GO:0006352
Apr9g0375 926 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 341 920 IPR045144 GO:0005669|GO:0006352
Apr9g0375 926 MobiDBLite consensus disorder prediction 818 864 - -
Apr9g0375 926 MobiDBLite consensus disorder prediction 36 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0375 Apr-Chr9 5051355 5061574 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0375 9 5051355 5061574 Apr9g0375 9 5051355 5061574 ECH