Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0371 ATGGAACCTGTAGGAGCTTTTCCTGAAGGTGAGTGGGATTGCTTCCGCAGAATGTTTGCCAGTGAGGAGCATGATGATTACACCCCACAATTTCTTGCTCAAAGTCCACTTTTGCTAGGAGAACATGGTGATGAATTTGAAACACAACCCACATTTTGTTTTGCTCCTGAAGCTGGTGAAAATGAGCGTATGTTTTATTCTTTAGATGCTCATAACTCAAATTCGCAATATGTTTCTCAAGAAAGTAGTTACAGTAGCAATTGTAGTGGTGACACTGTCTTCATTGCCAATCCGGGTCATGCAAACTATTATTTTAGTTACCCTGATCATGTTCTAGAAAATAATAACTGTGCATACTCCATGGACTTTTGCATGGATGAGAAAAATTTTGTCCCTTTTCTCCCTTCGCTTAGTAACATTGATGTATTAGAAGAGAGTGTTAAGTTGAGTGAAGACGTGGGAAGTGATCAGAGATTAGAGAATTCTGATCACACTCAAATGGAACCAATTGTTTTTCCAACCAAGCAGCTGCAGCTCAAAAGGAAGCTTGATGTGCCTGCTGAAGATAAAATGAACAACACACCTGAGAATCACAAGAAAAAGCCTCGTGTTTCAAAAGATGGGCAAGGATGCATGAAAAATGCACGGTCCAAGAAGAACCAGAAACTTGCCAGCAATGGGGAGGAAGCAGAAGAGATTAATGTAGGATCAGATGGACAAAGCTCTTGTAGTAACATGTCAGAGGATGATAATGCTTCTATAGAAAATAGTGGAGGAGCTACTTCAGGATCTAAATCTGCTTTAAACTCGAATGGGAAGACAAGAGCCAGTAGGGGATCAGCAACAGATCCTCAAAGTCTATATGCAAGGAAAAGAAGAGAGAGAATAAATGAGCGACTAAGAATCCTACAGAATCTTGTCCCAAACGGAACAAAGGTTGATATAAGTACAATGCTTGAAGAAGCAGTCAATTATGTGAAATTTTTGCAGCTCCAGATTAAGGTATGTACACCGCTTCTAAGTTCCGATGATCTATGGATGTATGCTCCACTTGCTTATAATGGCCTTGACATTGGAATCAATCTCAACCTCAAGAATTCTCCATCATTATGA 1113 0.3989 MEPVGAFPEGEWDCFRRMFASEEHDDYTPQFLAQSPLLLGEHGDEFETQPTFCFAPEAGENERMFYSLDAHNSNSQYVSQESSYSSNCSGDTVFIANPGHANYYFSYPDHVLENNNCAYSMDFCMDEKNFVPFLPSLSNIDVLEESVKLSEDVGSDQRLENSDHTQMEPIVFPTKQLQLKRKLDVPAEDKMNNTPENHKKKPRVSKDGQGCMKNARSKKNQKLASNGEEAEEINVGSDGQSSCSNMSEDDNASIENSGGATSGSKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKVCTPLLSSDDLWMYAPLAYNGLDIGINLNLKNSPSL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0371 370 MobiDBLite consensus disorder prediction 181 207 - -
Apr9g0371 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 280 329 IPR011598 GO:0046983
Apr9g0371 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 280 340 IPR036638 GO:0046983
Apr9g0371 370 MobiDBLite consensus disorder prediction 235 284 - -
Apr9g0371 370 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 368 - -
Apr9g0371 370 CDD bHLH_AtIND_like 281 347 - -
Apr9g0371 370 Gene3D - 282 336 IPR036638 GO:0046983
Apr9g0371 370 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 3 368 - -
Apr9g0371 370 Pfam Helix-loop-helix DNA-binding domain 290 330 IPR011598 GO:0046983
Apr9g0371 370 MobiDBLite consensus disorder prediction 153 287 - -
Apr9g0371 370 SMART finulus 286 335 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0371 Apr-Chr9 4992157 4994095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0371 60 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 42.056 7.86e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr9g0371 HLH 1.3e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0371 9 4992157 4994095 Apr9g0371 9 4992157 4994095 ECH