Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0370 ATGGCCTCAGTGGAGCAGCCTCCGAAGAAGCGAAAGCTCTACGAGCCTTTACCGAAATCACAACCGCCTTCCCCTCCGCCACTGTCACCGCCGGCAACCGACGCATCCCCTCCCTCTCCGCAAACCCTACCCACGCCGTCTCAGGAGGAGATTCTTGCGAAGCGGCGAAACAAGGATGAAATTCGAAGCGTGTACGAAGGTTACAAGCGGATTAAGCTTTGCTTGCTTCAGAAAGACGCTACCTCCATGTCTGACCTTGAACAAAGTTATCTCGCTCTCATCGCTTCTTCCAGAGGACCAACATCAGCTGTAATTAGAGGAATTTGCTCAGCAGTTTTTCAGAACGTGCTTACTTTTTTTATAGCTTTCTTTGAAGGAAAGGATGTTCTACAGATGATTGACAAGACTTTCCTGAATATGCAAGATGCCCCTGAGGTCTTTTCTGAGTTGAAGCAAAAGGTTTTAGATGAAGATGAATCTTCATTGACTAAACTGTCCAAATTCTGCATATTATGTCTGCTTTGGATATTCTTCTCTTGTCCTAAAGATTTGCTTGCAGCTTCTTTGGAGCTCTTGAGCTCTGCCTCAAAAGAGGGAGCTAATGGTGAAGGACAGCGTTTTCTGAGCCTTGTGACTAGGACATTTGATGATGATGAAGCAGTTAACCTTTTGGATAGAGCAATTGGTGGACCTAAATCATGTACAGATTCTACTGGTGAGGAAACTATGACTGAAAACAACCATGTTTCTGGTGGTGATTCATCTATTCAAAAGAACTGCTTGCTTACACAGGTTTTTGACAAGGAGCCCTCACTGCAGAAATGGATGTTGTGTAGATGTAGGAAGTTACTTGACTTGCTTAGTAATGCTTCACTGGAGATTACATCAGTAGTGCAAGGAATTCTTGGAATACTTGCTCAACAAACAGATTTGGAAGACTGTCAGGCAGATAGTGATGAAGATAAATCTGATTCTTTAACTTACATGAATAGGAACTATGTGGTTACTACGATATCTGAGGAACATGAAAGCATTAGTGAATCATCTGGAAAAGGCAGCAATTTAAGAGTTCATGTTGGTTCTTCTAATGATGGTTTTACTGACAAGGTTTCTGATAAACATGTGATGGCTAGTAGCTCTGCTGTTTCTCTTGACAAAGTTCCTGTACCTAAAGTGGCTTCACATTTCGATAATGGAGTCTCAAGGCCCATGGGCATTGGGATGGGGGAGGAAGGGAATATGCCTAATGCTAGATGTTCCACACCTAGGGACTCTGTGAGCCATCAAATATTTTCTCCTGCAGTTAGAACACCTGTAGACTTTAGGAGTAATTCATTTGAAGGCAGAAATGATTTCCCCAATGCTGAGAAAAATCAAGTCCAAAATATGAATTTTAACTCACCTCCATTGAGGTCCTCTGGTGGATCTGTTAGTAATTCTTTGGCATCTCCTAATCATCATTTTATGTCCCCAACTGCTTCAACAAAAAGTCAAATTGTCTGGTGCTGTGATGGTGATCCTGCAGCCATGGATATTCTCTCTGCTTCTAAGCAGCTATGGGTAGGTTGTGTAGGACCTGATGTACCTGAAAGTCATATTAGGTTTCACGTAGAGAGGTTTGGTCCTATTGAACAATTTATTTTCTTTCCAGTAAAAGGATTTGCCTTGGTTGAGTATAGAAGGATCATTGATGCGATAAAAACTCGATACTGTTTACCTGGATGTTTTCCTTGCCGTGTCAAATTCATGGATATAGGACTTGGAACTAGGGGTGCATTGAATGGTGTTGCTGTTGGGTCTAGTTCTCATATTTATGTGGGAAATATTCCCAGTCAATGGGCCAAGGATGAGATCCTTCATGAATCTAGGAAAGTGATCCACAAGGGTCCTCTTGCAGTCATTGATCTAAGCTGTGAATTTGCACTACTTTTGGAATTTGAAACTCCTGAAGAAGCTGCCACTGTCATGTTGCATTTGAGACAGCTTCGAAGAGAAAGAAGTAACTATAATAAGCATTTTGGCCCAGGAACAGGTAATGTTGGAATTGGGCATGCTTATATGGATGGTGCAAGGTCTGTATCTGCCCCTCTCCATCTTGATGTTAAAGTCAACAATCCTGTTGGATCACCTCATGCTCGAACTCTATCTGGGAGCCCGGCTGACAGCAATCGAACAAGAATGTCCCACTTGTCCTCCTTACTTGCTTCATTGCGTACAAAGTATAATATTAATCAAAACATAGGTTTTAATGATAACTATATGACTGGAAATAATTGTCCTTCCATGCGTGATGTAGATACAGCGCAGTCCAGCACTCTCTGCATAACTATTTCACGTAGTAGCTCTTTGCTTCTCACAGATGATGAGTTGATGGCCATTTGCAATCTTGCCATTGGAAACTCTGGATCCATTGTGCGGTTGACACAAGCAAACATGCAGATGGGATGTGGTTGGTTTGTTGAATGTAGTAATGTTGATGGTGCAGTTTCTGTTCTAAAGAATCTCCGTGGTTGTCCAGGATCATTCTTCCAGATAGAATTCAGCAAACCTGGAAATCAGAATGCTGTACCATTTCCAGTTAAACCAGAGAACAATTCTATGGAGCTTGTATCCCCAAGAATAAATTCTGAGAATCATACCATTGGAGTACATGGTGCACCGTTGTCTCAGTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGGTTGGAGCAAGGAAACCTGATGGTTATGATAATTTATCACTGGATCCTCATCAAGGAGGTAATGTTCCACATTCACACCCAGGAACACATGGACCATCCATCCCACCACCACAACAAATTCAGTCATCTCCTTTCATTCGCCCTGTTTATGTTCCTCCAAATGGCCAATGGGATCCTCAGGGAATAAACAATCATTTACCTGCCAACCAATTCAAGATGGGAGTAATGCCGAATAATTTTCATGGTAGTGCTGTTGTAACTCCTTTTATTCCTGCTTCAGTAACTCCACTTGCTCAGATACAAGTAACTCCAATGCAAACCTATAACCAGCAGGTGCCTCCATCAATTATACCACCACCTTTATCATCCTTGCCACCCCCTCAGCCTGAAATGCCACCCCCACTTCCTCCTTCTCCACCACCTTTGCCCCAGGTTCAGCCACCCTTGGTTCCTCCACCACCTGGTTCTCCTCCTCCTCCTCCACCACCACCACTGCCTGTCCAAGAATCAGTCAATATGGAATGTTCGGGGCAATATCTTCAGTATCAATGGCAGGGGAATCTCTGTAAAAGTGGGGTTAACTACTGTACAATTTATGCATTTAGAGCAGATTCAAATATTTGCAGATATTCAAATGCCATCCCTGAGCCTGCTGAGTGGCCCACAAAATTAGACATGACAAAACGCACAGATCTTCGACATGTAAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTCTGATCCCATCATCCACAAGTGACCACAGGAGGTTTCAGGACTTCGTATCATACTTAAAGCAGAGAGATTGTGCTGGGGTTATTAAAATTCCAGCTTCAAAATCCATATGGGCAAGGCTACTATTCATTCTCCCCTACTCACTTGAAACGTGCTCTTTGCTCTCTATTGCACCTGAACCGTCAGATTGCTTAATCGCGTTAGTTTTGCCGAAAGAAACAAACTTTGAGTGGGTATGA 3699 0.4296 MASVEQPPKKRKLYEPLPKSQPPSPPPLSPPATDASPPSPQTLPTPSQEEILAKRRNKDEIRSVYEGYKRIKLCLLQKDATSMSDLEQSYLALIASSRGPTSAVIRGICSAVFQNVLTFFIAFFEGKDVLQMIDKTFLNMQDAPEVFSELKQKVLDEDESSLTKLSKFCILCLLWIFFSCPKDLLAASLELLSSASKEGANGEGQRFLSLVTRTFDDDEAVNLLDRAIGGPKSCTDSTGEETMTENNHVSGGDSSIQKNCLLTQVFDKEPSLQKWMLCRCRKLLDLLSNASLEITSVVQGILGILAQQTDLEDCQADSDEDKSDSLTYMNRNYVVTTISEEHESISESSGKGSNLRVHVGSSNDGFTDKVSDKHVMASSSAVSLDKVPVPKVASHFDNGVSRPMGIGMGEEGNMPNARCSTPRDSVSHQIFSPAVRTPVDFRSNSFEGRNDFPNAEKNQVQNMNFNSPPLRSSGGSVSNSLASPNHHFMSPTASTKSQIVWCCDGDPAAMDILSASKQLWVGCVGPDVPESHIRFHVERFGPIEQFIFFPVKGFALVEYRRIIDAIKTRYCLPGCFPCRVKFMDIGLGTRGALNGVAVGSSSHIYVGNIPSQWAKDEILHESRKVIHKGPLAVIDLSCEFALLLEFETPEEAATVMLHLRQLRRERSNYNKHFGPGTGNVGIGHAYMDGARSVSAPLHLDVKVNNPVGSPHARTLSGSPADSNRTRMSHLSSLLASLRTKYNINQNIGFNDNYMTGNNCPSMRDVDTAQSSTLCITISRSSSLLLTDDELMAICNLAIGNSGSIVRLTQANMQMGCGWFVECSNVDGAVSVLKNLRGCPGSFFQIEFSKPGNQNAVPFPVKPENNSMELVSPRINSENHTIGVHGAPLSQSNWHFPGSREMSEVGARKPDGYDNLSLDPHQGGNVPHSHPGTHGPSIPPPQQIQSSPFIRPVYVPPNGQWDPQGINNHLPANQFKMGVMPNNFHGSAVVTPFIPASVTPLAQIQVTPMQTYNQQVPPSIIPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPPPGSPPPPPPPPLPVQESVNMECSGQYLQYQWQGNLCKSGVNYCTIYAFRADSNICRYSNAIPEPAEWPTKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSTSDHRRFQDFVSYLKQRDCAGVIKIPASKSIWARLLFILPYSLETCSLLSIAPEPSDCLIALVLPKETNFEWV* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0370 1232 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 100 1231 - -
Apr9g0370 1232 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1 103 - -
Apr9g0370 1232 MobiDBLite consensus disorder prediction 18 44 - -
Apr9g0370 1232 PANTHER NUCLEIC ACID BINDING PROTEIN 1 103 - -
Apr9g0370 1232 PANTHER NUCLEIC ACID BINDING PROTEIN 100 1231 - -
Apr9g0370 1232 MobiDBLite consensus disorder prediction 1016 1071 - -
Apr9g0370 1232 MobiDBLite consensus disorder prediction 1 48 - -
Apr9g0370 1232 SUPERFAMILY RNA-binding domain, RBD 506 576 IPR035979 GO:0003676
Apr9g0370 1232 Gene3D - 508 585 IPR012677 -
Apr9g0370 1232 Pfam SPOC domain 1082 1223 IPR012921 -
Apr9g0370 1232 MobiDBLite consensus disorder prediction 1014 1072 - -
Apr9g0370 1232 MobiDBLite consensus disorder prediction 887 966 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0370 9 4941488 4957793 Apr9g0370 9 4941488 4957793 ECH