Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0369 ATGAAGAAGAACACAATCATCATGAGTTACTCCCCTGCCACTCCTAGATCCCCTCCAATGGATCCCACGATTTGGAGCAAATTACCACCCGAAATCCTCGAATACATACTCTCTTTTCTTCCTCTCAAAACCTTCCTGAGTCTCAGATCCACTTGCAAAGGTTTTTGGTCTCTCATATTCTCTCCCTCCTTCATTTCTAAACACTGTTCTTCTTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCACCCTTCTCCTCTTTTCTCTTACTTTCCCACCCTCAATTTCACCGCCATTTCCCTCTCTATGATTGCACCCATGGCACTTGGCGCAACATCTCTCTCTCACTCTCTGATTCACTTCACTCATCTCCTTCCTTCACTACTCTTGTCTCTTCTGGTGGTCTTTTTTGCTTATCTGATTCCACATCATGTTCTTTGCTCGTGTGCAACCTTTTAGCCAAATCTTCTCGAAAGATTCAATACCCAAGCTTCTCTCTTCACTTGGAACATCTTACTTTTGTTACCACCCCAACTGGGTATATCATTTTTGTTCTTTGTTCTGAGTCTGCTTCAAGCATTGCCTTTGTTTATGACTCAAATGTTCAATTTTGGAAAAGATTTGAAGGTTTTGGTCCAGTTTTAGGGGACAACCATCACCAACAAGGAGTTTTCTGTAATGGGGGGTTGTATTTTGCGACCACAGAACCTTTTTCAGTGGTGATCTTTGATTTGGAGAATGGAAAGTGGGAGAGACCCATTGGGGAGTTACCGAGCCAACTCACCTTTGTTCGATTGGTGAGTGATGGAGAGGGAAAGTTGTATTTGGTAGGTGGGGTTGGGAACAATGGAATATCAAGGAGCATTAAGTTGTGGGAAATGGGTGAAGATGGGAATTGGGTGGAAGTGCAGAGTTTGCCCGATCTTATGTGCAGAAAGTTTGTGTCCGTGTGTTACCATAACTATGAGCATGTTTATTGTTTTTGGCATGAAGGGATGATTTGCATTTGCTGCTACACGTGGCCGGAGATTTTGTATTACTTGGTTGCTAGGAGGACTTGGCATTGGCTTCCCAGGTGCCCTTCTTTGCCTTTGAAATGTAGCTGTGGTTTCAAGTGGTTTTCTTTTGTTCCAAAGCTCTATGCTTTGGTCTGA 1155 0.4346 MKKNTIIMSYSPATPRSPPMDPTIWSKLPPEILEYILSFLPLKTFLSLRSTCKGFWSLIFSPSFISKHCSSSSSSSSSSSSSSPFSSFLLLSHPQFHRHFPLYDCTHGTWRNISLSLSDSLHSSPSFTTLVSSGGLFCLSDSTSCSLLVCNLLAKSSRKIQYPSFSLHLEHLTFVTTPTGYIIFVLCSESASSIAFVYDSNVQFWKRFEGFGPVLGDNHHQQGVFCNGGLYFATTEPFSVVIFDLENGKWERPIGELPSQLTFVRLVSDGEGKLYLVGGVGNNGISRSIKLWEMGEDGNWVEVQSLPDLMCRKFVSVCYHNYEHVYCFWHEGMICICCYTWPEILYYLVARRTWHWLPRCPSLPLKCSCGFKWFSFVPKLYALV* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0369 384 SUPERFAMILY Galactose oxidase, central domain 100 362 IPR011043 -
Apr9g0369 384 Pfam F-box domain 25 55 IPR001810 GO:0005515
Apr9g0369 384 Gene3D - 87 372 IPR015915 GO:0005515
Apr9g0369 384 ProSiteProfiles F-box domain profile. 22 68 IPR001810 GO:0005515
Apr9g0369 384 SUPERFAMILY F-box domain 17 100 IPR036047 GO:0005515
Apr9g0369 384 Gene3D - 22 67 - -
Apr9g0369 384 PANTHER F-BOX/KELCH-REPEAT PLANT PROTEIN 24 382 - -
Apr9g0369 384 SMART fbox_2 28 68 IPR001810 GO:0005515
Apr9g0369 384 PANTHER F-BOX/KELCH-REPEAT PROTEIN 24 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0369 Apr-Chr9 4921735 4923137 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0369 9 4921735 4923137 Apr5g1463 5 18681461 18682632 PCT