Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0364 ATGTTGTGTGCTTGTTCCGGGGAGCAATTCAAATTTGAAGAGGCGCCACAGTCACCTGAGTCCTTGGCTACAAGGGACTTCTCTGCCAGTGGAATTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGATGAAACACAAGTCGAAGATGTAGAATCTACTCTAAAAGAAGCTCTCTCATTAAACTATGAGGAAGCTCGAGCTTTATTAGGGAGGCTTGAATATCAAAGAGGGAACTTTGATGCTGCTCTTCAAGTGTTTCAGGGTATAGATATCAAGGCTTTGACCCCAAGGATGATCAAGGCTATAGCTGAAAGAACCAAACTAAGAAAATCACGTTCCAAGCCAGATAATGTGCTTCCTAATGTGATGTCAATGCATTCAGTAAGCCTCCTTCTTGAGGCAATTTTGCTAAAAGCAAAATCCTTAGAAGAACTTGGGCAATACACCGAGGCTGCAAAGGAGTGTAGAATAATAGTGGATACAGTTGAATCTGCACTTCCTAATGGAATGTCTGAGGGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCCACAAAGCATTGGAGTTACTTCCAAATTTATGGATCAAGGCAGGTTTTCTAGATGAAGCTGTCACTGCTCATCGGCGGGCGTTGGTCAAGCCCTGGAATTTGGAGCCACAGAGGTTGGCCTGTGTGCAAAAAGATTTAGCTACCACACTACTCTATGGTGGTGTTGAAGTAAACCTACCTTCTCAGTTGCAAGTGAAGGGTCTAACAACACCTATGAGTAATATTGAAGAAGCAATACTTTTGCTATTAATTCTCTCAGGAAAGATGATACTTCAGGAAATAGACTGGGATGCTGAAATAATGGATCATCTCACATTTTCGCTTTCAATTACTGGGATGTTTGAATCGTTGGCAGATCATGTGGAGCAGATCCTTCCAGGTATCTATGATCGAGCTGAGAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGGAACAATGAAGTAGCCTTGAACCTTCTGAGAAAGGCTTGTGGTAGTTCTGAAGCAAGGCATAGACCCCATTTTCCTTCATTTTTGTATGGTGCAAACCTGTGTTCCCTGTATCCAAACCATGCTCATGAAGGCATTAAATTTTCACGGGAAGTTATTGATCTAGCCAAGCATCACAATGAGCATTTTTTGGGTCAAGGCAAAAAATTTCTTGGCATTTGCCATGGTGATGCTGCTAGAATATCTGTAGTGGATTCTGAAAGAGTTATATTTCAAAGAGAATCCTTGAACTTTCTAAATGATGCTGCTATAACGAAAAATGGTGATCCAGAAGTAATATTCAGCCTTGGACTGGAAAATGCAATTCAAAGGAATCTAAATGCAGCTTATGACAATATAATGATGTACTTAGACATGATGGCTGGAAGCTCAAGAAGAGGTTGGCAGTTGTTAGCACTCATAGTATCAGCTCAGCAGCGGTTTAAGGATGCGGAAACTGTAGTTGATTTTGCGATCGATGAGGCTGGGAGGACAGATCAATTAGAACTACTAAGACTGAAAGCTGTACTTCAAATTGCTCAGCAGCAACCCAAACATGCAATAGAAACCTACAGAATCTTGCTAGCAGTAATTGAAGCACAAAAGGAGCTTTGGCTTCAAGCTAAGAATTTAGATCAAGCACAAACATTCCGGCATGAGGCATTAGCAGAACGAAGGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACCATTTATGCAGATATTAGTTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAGGCCCAGTTGATAGAATTTTTTTCTCCCAGAAGTTGGCATATTACAGGGACATTGTTTGAAGCTCAATCATTAAACAAGGAGGCCTTTGTTTCCTTCTCTGTCTCATTGTCAATTGAACCAGATTACATTCCCAGTATCATTTCAACTGCAAAATTATTGCTTAAACTTGGCATGCAATCACTTCCTCTTGCAAGAAGCTTTTTAATGAATGCTTTGCGAATAGAACCTACAAACCATGATGCATGGTTTAACCTTGGATTGGTTTCAAAAATGGAAGGTTCATTACAACAAGCAGCAGATTGCTTTCAAGCTGCATATGAGCTGAAGCTTTCAGCTCCAGTACAAAAGTTTGAGTGA 2148 0.4088 MLCACSGEQFKFEEAPQSPESLATRDFSASGISSRTGDWESKFDETQVEDVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKALTPRMIKAIAERTKLRKSRSKPDNVLPNVMSMHSVSLLLEAILLKAKSLEELGQYTEAAKECRIIVDTVESALPNGMSEGIGEDCKLQEMFHKALELLPNLWIKAGFLDEAVTAHRRALVKPWNLEPQRLACVQKDLATTLLYGGVEVNLPSQLQVKGLTTPMSNIEEAILLLLILSGKMILQEIDWDAEIMDHLTFSLSITGMFESLADHVEQILPGIYDRAERWYFLALCYSAAGNNEVALNLLRKACGSSEARHRPHFPSFLYGANLCSLYPNHAHEGIKFSREVIDLAKHHNEHFLGQGKKFLGICHGDAARISVVDSERVIFQRESLNFLNDAAITKNGDPEVIFSLGLENAIQRNLNAAYDNIMMYLDMMAGSSRRGWQLLALIVSAQQRFKDAETVVDFAIDEAGRTDQLELLRLKAVLQIAQQQPKHAIETYRILLAVIEAQKELWLQAKNLDQAQTFRHEALAERRLEMEAWQDLATIYADISSFLDAKACVDKAQLIEFFSPRSWHITGTLFEAQSLNKEAFVSFSVSLSIEPDYIPSIISTAKLLLKLGMQSLPLARSFLMNALRIEPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQKFE* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0364 715 PANTHER PROTEIN NPGR1 1 714 - -
Apr9g0364 715 SUPERFAMILY TPR-like 573 706 IPR011990 GO:0005515
Apr9g0364 715 ProSiteProfiles TPR repeat profile. 676 709 IPR019734 GO:0005515
Apr9g0364 715 Gene3D Tetratricopeptide repeat domain 545 710 IPR011990 GO:0005515
Apr9g0364 715 Gene3D Tetratricopeptide repeat domain 257 544 IPR011990 GO:0005515
Apr9g0364 715 SUPERFAMILY TPR-like 424 599 IPR011990 GO:0005515
Apr9g0364 715 PANTHER PROTEIN NPG1 1 714 IPR043376 -
Apr9g0364 715 Coils Coil 56 76 - -
Apr9g0364 715 Gene3D Tetratricopeptide repeat domain 13 216 IPR011990 GO:0005515
Apr9g0364 715 SUPERFAMILY TPR-like 65 462 IPR011990 GO:0005515
Apr9g0364 715 SMART tpr_5 606 639 IPR019734 GO:0005515
Apr9g0364 715 SMART tpr_5 676 709 IPR019734 GO:0005515
Apr9g0364 715 SMART tpr_5 133 166 IPR019734 GO:0005515
Apr9g0364 715 SMART tpr_5 511 544 IPR019734 GO:0005515
Apr9g0364 715 SMART tpr_5 317 350 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0364 Apr-Chr9 4855016 4858915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0364 1 714 Calmodulin-binding Proteins AT1G27460 58.078 0.0 843
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0364 9 4855016 4858915 Apr9g0364 9 4855016 4858915 ECH
Apr9g0364 9 4855016 4858915 Apr5g1456 5 18622178 18625895 PCT