Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1714 ATGACACCCGATGAAACCCCACCTCCAAAGGCCACAACTACAACAACAAAAGACAATGACAACCAAGGATCCGGTGGCCGGAAAAACTCCTCCACGAAACCCCAAGAGCAAGGCCTCAAGTGCCCAAGATGTGACTCACCCAACACCAAATTCTGCTACTACAACAACTATAGTCTCACACAGCCAAGGCATTTCTGCAAGACGTGTAGAAGATACTGGACAAAAGGTGGAGCTTTGCGAAACGTGCCTATAGGTGGGGGGTGCAGGAAGAACAAGAAGGTAAAGTCATCAAGGCTCTCATGTGACTCCAAAGACTCTGCATCCTCTTCCGACCTTGGTGGCCTCAAGTTCCTTCATGGTCTTTCTCCTTCTATGGACTTTCACCTTGGAGGGTTACCCTTCCCTAGGCTGAATCATCATCCTCCAAACACTTCCATCTATAACCAGTTCTCCTCTTTTGGAGACACTTCTAGTGCTTCTTCACCTTTCAACCTCGATCCTTCTTCTGCTGCCTCAAATCCCTTGGCTGCAATGAATTACCCACTTTCTTACAATGGTGCAATCCAAGGCATGAGCTCCATGAACGTTCACACTACCCTTGCTTCTTCCATTGAGTCATTGAGTTCTATAAATCAGGACTTGCACTGGAAGTTGCAGCAGCAGCGATTGGCGATGCTGTTTGGTGGAGATCATAGCCAGAAAGATAGTGGGGTGGTGTCAACGGTTAACCAGCTTGAGAACCAGACCCAGAAGCCTCAACCCATTTTGTTTCAGAATCTTGAGATCTCAAAGCCAGGGAGTTTCCCCGTTGGGAGTTCCAGAAAAGAACAAGGGCCAAGTGGGGACACACCATCTACCGAGTGGTTCTTTGGAAACTCTTATGCCTCAGTGGCTCCTACACCAACAACCACTAGTGGTGGCCCTGCGAATGATAATGCAAGCAATTGGAGTAGTGGTGTCCATGCTTGGGGTGATGTGCAGCAGCAATATAGTGCTTTGCCCTAG 1005 0.4846 MTPDETPPPKATTTTTKDNDNQGSGGRKNSSTKPQEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSRLSCDSKDSASSSDLGGLKFLHGLSPSMDFHLGGLPFPRLNHHPPNTSIYNQFSSFGDTSSASSPFNLDPSSAASNPLAAMNYPLSYNGAIQGMSSMNVHTTLASSIESLSSINQDLHWKLQQQRLAMLFGGDHSQKDSGVVSTVNQLENQTQKPQPILFQNLEISKPGSFPVGSSRKEQGPSGDTPSTEWFFGNSYASVAPTPTTTSGGPANDNASNWSSGVHAWGDVQQQYSALP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1714 334 MobiDBLite consensus disorder prediction 1 41 - -
Apr7g1714 334 MobiDBLite consensus disorder prediction 273 320 - -
Apr7g1714 334 MobiDBLite consensus disorder prediction 7 37 - -
Apr7g1714 334 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 20 334 - -
Apr7g1714 334 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Apr7g1714 334 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 334 IPR045174 GO:0003700|GO:0006355
Apr7g1714 334 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Apr7g1714 334 MobiDBLite consensus disorder prediction 266 320 - -
Apr7g1714 334 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1714 Apr-Chr7 24374945 24376588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1714 30 334 C2C2-Dof Transcription Factor Family AT5G65590 42.540 6.84e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Apr7g1714 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1714 - - vun:114173233 507.294