Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1435 ATGCTTCCCGCTCATTTTCTTCAGTCTCATATGTTCAACCATTTGCAACCGAAACACACAGAAAAAGAGATGCCACTGTACATGCCATTGTTCAGATCATGTTCAACCATAAGAACACTCACCCAGCTTCATGCCCACCTCGTTGTCAATGGCCTCCACAACGATCCACTTGCCTCTACAAAGCTTCTTGATTCCTACGCCCAAATGGGTTCTCTCCATTCATCAAGACTTGTTTTTTATGCACACCCATTTCCTGATTCCTTCATGTTGGGGGTTCTCATCAAGTGTTACCTCTGGAACCACTTGTTTCACCAAGTGCTTTCGCTTTACCATCACTACTTTCAAATGGGTTCCCACCTCACCAAAAACTGTAGCTTTATATACCCTTCTGTTTTGAGAGCTACTTCTGGTGTTGGTGACTTGGTTATGGGCAGAAAAGTGCATGGTAGGATAGTTAAGTCTGGGTTTAGCTCTGATCATATTATTGGAACTTCGTTGCTTGGAATGTATGGGGGATTGTGCTGTTTAGATGATGCTCGGAAGGTGTTTGATGGAATGTGTGAGAGAGATTTGGTTTCTTGGAGTTCTGTTGTATCTTGTTATGTTGAGAATGGGCGACCGAGTGAAGGATTGGAGATGTTGGGTTGGATGGTCTCTGAGGGAATTAGACCTGACTCGGTTACGTTGCTAAGTGTGGCCGAGGCTTCTGCCAAAGTTGGTAGCTTGAGTTTAGCAAAATCTGTCCATGGATATGTGATTAGGAATGGGATGGTTGGTGATTTGAGTTTGAGGAATTCTCTTATTGTTATGTACAGCCAGTGTGGAGACGTCTGTAGAGCAGAAGGGGTCTTTGAAAGCCTCGCTGATCGAAGTACTGCATGTTGGACTTCTATGATTTCGTCATATAATCAAAACGGGTGCTTTGATGAAGCAATAGATGCTTTTGTTCAGATGCAGGAATCAGAAGTAGAACCTAATGCAGTGACAATGATTAGTGTTCTGTATTGTTGTGCTAGGGTAGGTTGGTTAAGAGAGGGGAAGTCGGTTCATTGCTTTATTTTAAGGAAAGAAATGGATGCCACTGATATTGATCTGGTACCTGCACTGATAGATTTTTATGCTGCATGTTGGAAAATAAGCAGTTGTGAAAAACTTCTTCATTTGATGGGAAACAGCAATGTTGTATCATGGAACACACTTGTATCATTTTATGCTCGGGAGAGTTTAAATGAGGAGGCCATGACACTCTTTGCTCGTATGTTGGCAAAGGGGATAATGCCAGACTCATATAGCTTAGCAAGTACTATTTCAGCGAGTGCGAATGCTGGTTCAATACAATTTGGACAGAAGATACATGGTCATGTCATGAAAAGAGGCTTCATGGACGAATTTGTTCAGAACTCCTTGATGGATATGTATTCAAAATGTGGCTTTGTAGATTTGGCATACACAATTTTTGACAAAATGATGCACAAAAGCATTGTGGCATGGAACTGTATGATTTGTGGGTTTTCTCAAAATGGCATATCAGTAGAAGCACTCAAGCTATTTGATGAGATGTACTTCAATTGTCTTGACATCAATGAAGTAACCTTCTTAAGTGCGATTCAAGCTTGCTCAAATTCAGGTTATCTTGAGAAGGGAAAATGGGTTCACCATAAGATCATTGTATCTGGCATGCAGAAGGATCCTTATATTGATACAGCTCTGGTTGACATGTACGCCAAGTGTGGAGACCTTAAAACGGCACAAGGCGTCTTTGATAGCATGCCTGAGAAAAGTATAGTGTCATGGAGTGTCATGATTGCTGCTTATGGCATACATGGTCAAATAATTGCTGCCACCACCCTCTTCACTAAAATGGTAGAGTCGGATATTAAACCAAATGAAGTAACCTTCATGAATATCTTATCTGCATGTAGGCATGCTGGATCAGTGGAGGAAGGGAAGTTATATTTTAACTCAATGAGGGATTATGGCATAGTGCCCAATGCAGAACATTTTGCCTCTATAGTTGACCTTCTAAGCCGCGCCGGCGATATCAACGGGGCATATGAAATAATTAAGTCCACATACATGCCTGTAGATGCTAGCATTTGGGGCGCTCTACTGAATGGATGTCGCATACATGGGAGGATAGACTTGATTAAGAACATTGAAAAAGAACTTGGAGAAATAAGTACAGATGATACAGGGTACTACACGTTGTTATCTAACATATATACTGAAGGTGGAAACTGGTATGAATCCAGAAAGGTGAGATCAAGAATGGAAGGAATGGGCCTAAAGAAGGTCCCTGGGTACAGTACAATTGAGATAGGTAGGAAAATCTACAGATTTGGATCTGGAGATACTTCTGAATGGCAAATGAATGAAATTTATAAATTTTTGGAAAATTTTCACAGTATAGCACAGGAACAAGGATGTGATGTAGAATGCTATGGTGCAATGTATGGTACTAGTATGTTTTTTGAGGATTATAGTTGTTATAACTTGCAGACAGAAACTAACCATTGCATTTGGAATAAATCAGTCCCATTTTAG 2544 0.4076 MLPAHFLQSHMFNHLQPKHTEKEMPLYMPLFRSCSTIRTLTQLHAHLVVNGLHNDPLASTKLLDSYAQMGSLHSSRLVFYAHPFPDSFMLGVLIKCYLWNHLFHQVLSLYHHYFQMGSHLTKNCSFIYPSVLRATSGVGDLVMGRKVHGRIVKSGFSSDHIIGTSLLGMYGGLCCLDDARKVFDGMCERDLVSWSSVVSCYVENGRPSEGLEMLGWMVSEGIRPDSVTLLSVAEASAKVGSLSLAKSVHGYVIRNGMVGDLSLRNSLIVMYSQCGDVCRAEGVFESLADRSTACWTSMISSYNQNGCFDEAIDAFVQMQESEVEPNAVTMISVLYCCARVGWLREGKSVHCFILRKEMDATDIDLVPALIDFYAACWKISSCEKLLHLMGNSNVVSWNTLVSFYARESLNEEAMTLFARMLAKGIMPDSYSLASTISASANAGSIQFGQKIHGHVMKRGFMDEFVQNSLMDMYSKCGFVDLAYTIFDKMMHKSIVAWNCMICGFSQNGISVEALKLFDEMYFNCLDINEVTFLSAIQACSNSGYLEKGKWVHHKIIVSGMQKDPYIDTALVDMYAKCGDLKTAQGVFDSMPEKSIVSWSVMIAAYGIHGQIIAATTLFTKMVESDIKPNEVTFMNILSACRHAGSVEEGKLYFNSMRDYGIVPNAEHFASIVDLLSRAGDINGAYEIIKSTYMPVDASIWGALLNGCRIHGRIDLIKNIEKELGEISTDDTGYYTLLSNIYTEGGNWYESRKVRSRMEGMGLKKVPGYSTIEIGRKIYRFGSGDTSEWQMNEIYKFLENFHSIAQEQGCDVECYGAMYGTSMFFEDYSCYNLQTETNHCIWNKSVPF* 848
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1435 847 Gene3D Tetratricopeptide repeat domain 646 815 IPR011990 GO:0005515
Apr7g1435 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 190 224 IPR002885 -
Apr7g1435 847 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 35 297 - -
Apr7g1435 847 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 289 427 - -
Apr7g1435 847 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 423 799 - -
Apr7g1435 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 594 628 IPR002885 -
Apr7g1435 847 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 423 799 - -
Apr7g1435 847 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 35 297 - -
Apr7g1435 847 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 289 427 - -
Apr7g1435 847 Pfam E motif 721 772 IPR046848 -
Apr7g1435 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Apr7g1435 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 462 496 IPR002885 -
Apr7g1435 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 629 663 IPR002885 -
Apr7g1435 847 Pfam PPR repeat family 593 640 IPR002885 -
Apr7g1435 847 Pfam PPR repeat family 492 540 IPR002885 -
Apr7g1435 847 Pfam PPR repeat family 291 338 IPR002885 -
Apr7g1435 847 Pfam PPR repeat family 393 437 IPR002885 -
Apr7g1435 847 Gene3D Tetratricopeptide repeat domain 240 360 IPR011990 GO:0005515
Apr7g1435 847 Pfam PPR repeat 192 222 IPR002885 -
Apr7g1435 847 Gene3D Tetratricopeptide repeat domain 115 239 IPR011990 GO:0005515
Apr7g1435 847 Gene3D Tetratricopeptide repeat domain 526 645 IPR011990 GO:0005515
Apr7g1435 847 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 325 IPR002885 -
Apr7g1435 847 Gene3D Tetratricopeptide repeat domain 361 451 IPR011990 GO:0005515
Apr7g1435 847 Gene3D Tetratricopeptide repeat domain 452 525 IPR011990 GO:0005515
Apr7g1435 847 TIGRFAM PPR: pentatricopeptide repeat domain 395 428 IPR002885 -
Apr7g1435 847 TIGRFAM PPR: pentatricopeptide repeat domain 294 327 IPR002885 -
Apr7g1435 847 TIGRFAM PPR: pentatricopeptide repeat domain 596 630 IPR002885 -
Apr7g1435 847 TIGRFAM PPR: pentatricopeptide repeat domain 495 522 IPR002885 -
Apr7g1435 847 TIGRFAM PPR: pentatricopeptide repeat domain 465 495 IPR002885 -
Apr7g1435 847 TIGRFAM PPR: pentatricopeptide repeat domain 631 665 IPR002885 -
Apr7g1435 847 TIGRFAM PPR: pentatricopeptide repeat domain 192 226 IPR002885 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr7g1435 Apr-Chr7 21437574 21446007 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1435 7 21437574 21446007 Apr7g1435 7 21437574 21446007 ECH