Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1422 ATGGAAGATAAAGACAGAGCAACCTCCGATCCATCCACCGCCGCCGGTGACTTCGCCGGCGAGTCCAGTTGGCCCCTCGCCGCTGATGATTCGGACGGCTCATATTTCTTCTCCGGCGGCAGGGAGAGAAGCATACTCAGCGAGTTCGGGTGGAACCTCGAACCAGACCAACCGAACCGGATCGGCACCGACGATGGATTGTGGCTTCCGGCTCAGTCTTCTCTGACAGGTTCGATTGAACCAGCGGCGGCGGCGTCGTCCCGGTCGAATAACCAATCGGTGTCTTCAAGCTCCAGCGAGGATCCGCCGGAGAAATCGACCGTCTCCGACGAGAAACCGCCTGAGATACCGAGTAAAAGTAAGAAGAAGGGGCAAAAGCGAATACGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTGGATCACCTTGAAGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCATTCCCTAGGAGCTACTATCGCTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTAGAACGCTCTTCTGAGGACCCAACGATTGTGATTACTACATATGAAGGCCAACACTGTCATCACACGGTTGGATTTCCTCGAGGGGGAATCATTAATCACGAAGCTACCTTTTCAAGCCAATTGGCTCCTACAATGTCACAGTTCTATTACCCAATTCAATTAACCAGCGAGAATAATACCTTTAGCCCTATTTCTCAGCCTCGCCAAGCACAGGATGAAGCTGGAGGATCCAGCGGAATGATACCAGCTAATGCATCGTCTCAGCCTCCCACAGATGAGGGGTTGCTTGGAGATATTGTACCCCAGGGAATGCGCAGCAGATGA 867 0.5202 MEDKDRATSDPSTAAGDFAGESSWPLAADDSDGSYFFSGGRERSILSEFGWNLEPDQPNRIGTDDGLWLPAQSSLTGSIEPAAAASSRSNNQSVSSSSSEDPPEKSTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIINHEATFSSQLAPTMSQFYYPIQLTSENNTFSPISQPRQAQDEAGGSSGMIPANASSQPPTDEGLLGDIVPQGMRSR* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1422 288 MobiDBLite consensus disorder prediction 69 103 - -
Apr7g1422 288 MobiDBLite consensus disorder prediction 53 132 - -
Apr7g1422 288 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1422 288 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 13 219 - -
Apr7g1422 288 MobiDBLite consensus disorder prediction 104 121 - -
Apr7g1422 288 ProSiteProfiles WRKY domain profile. 139 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1422 288 MobiDBLite consensus disorder prediction 240 254 - -
Apr7g1422 288 SUPERFAMILY WRKY DNA-binding domain 136 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1422 288 MobiDBLite consensus disorder prediction 240 288 - -
Apr7g1422 288 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1422 288 MobiDBLite consensus disorder prediction 1 39 - -
Apr7g1422 288 Gene3D WRKY domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1422 288 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 219 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1422 Apr-Chr7 21331486 21339592 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr7g1422 WRKY 1.8e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1422 7 21331486 21339592 Apr7g1422 7 21331486 21339592 ECH