Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1421 ATGGAGGAGAGGAAGTTTGTGTGCAAGTATTGTAGCAAGAGGTTCCCTTGCGGCAAGTCTTTGGGTGGCCACATCAGGACCCATATGAGTGAACATTCAACTCAAGGCAATGATAATGGCAATGCTGCTAATGCTACGGCCAAGTTTGATCCTGGGAGAAAGAGGAAGAGGGATTTGGAGTCTGAAGTTGTTGATGGTGGCAACATCATTTATGGCCTAAGAGAGAACCCAAAGAAGACCACGAGGTTTGTTCACTCTAATGCGACTTTGCAACTTGACAAGTTCTGCAAAGAATGTGGCAAAGGTTTTCCATCGTTGAAAGCTCTCTGTGGCCACATGGCTTGTCACTCTGAAAAGGACAAGGGAACCAATAATAATAATAATCACAGGTTTGAGAACAATTCTGAGAAGCACAAGTTGGTTTTGGATAGTCAATCTGATACTGAAACTTCTGCTCCTACAAGGAGATCCAAGAGAATGAGGTTCAAGACCCTTAGCAATCAACCTCCTTCTTCTTCTGTGTCTGAGGTTGAGCAAGAACAAGAAGAGGTGGCTAGGTGCTTGATGTTGTTGTCCAAGGATTCCACCCACAAGGGTCGTTTTGCTTTGGTCACAGAGTCTTCTGATAACAACTCGGTTGTTCTTGAGGCTAAATCACCTTCTCTTGATACCAAGGTGACTGTGAATAACGGTAAGAATTTTGTGCCTAGTGCTTATGAGCTTGTGGACAAGAAGAAGCTGCTGCAGCACAAGGACATGAAGTTGAAGTTGAAGTTGAAATCTGCTGAGATTGGTTATGATTCTGATAATTCAGATTCTGGGTACTTCAGATACGGTCCTAAGAAGGTTGACTCTGATGGTTCAAATGAAGGGGTTTTCAGGAATGAAGTTAAGTCTTCAAAAGTTGGGTACTTTTCTGGGTTTGAGGACTATGATGTTGAATCTAGGAAGTTGCTGAGCAGAGGAGGAAGCGGGAGCAATGAGTTTAAGAAATTTGTTTTGGAGGATTCTAGCAGGAAGGTAGCAAATGGTTTTACCAATGATGGAATCATTGAGCATGGTGGTAAAGGGTGGAAATATGAGTGCTTGACTAGTGAAAGGGACAATGACTTTGATGATTTGGCTTATGAGAGTGATGAAAACAGCACAGACACTGATTCTTATCCTGCTCCAAAGACACACACTAGCAGGAACCCGAGTGGCAAGAAGTGTAGCAAAGGGAAGAAGAAATTGAAGTCAAAGAAAAGTAAAGCACATGAATGTCCAATTTGCAACAAAATTTTCAGGTCAGGCCAAGCCTTGGGAGGTCACAAAAGATCCCATTTTGTTGGAGGTTCTGATGAGAACACCCTTGTGATAAGACCAGGTGCTGCTTCTGTTCCTTGCCTAATTGATCTCAATCTACCTGCACCTGTTGATGAATAG 1425 0.4295 MEERKFVCKYCSKRFPCGKSLGGHIRTHMSEHSTQGNDNGNAANATAKFDPGRKRKRDLESEVVDGGNIIYGLRENPKKTTRFVHSNATLQLDKFCKECGKGFPSLKALCGHMACHSEKDKGTNNNNNHRFENNSEKHKLVLDSQSDTETSAPTRRSKRMRFKTLSNQPPSSSVSEVEQEQEEVARCLMLLSKDSTHKGRFALVTESSDNNSVVLEAKSPSLDTKVTVNNGKNFVPSAYELVDKKKLLQHKDMKLKLKLKSAEIGYDSDNSDSGYFRYGPKKVDSDGSNEGVFRNEVKSSKVGYFSGFEDYDVESRKLLSRGGSGSNEFKKFVLEDSSRKVANGFTNDGIIEHGGKGWKYECLTSERDNDFDDLAYESDENSTDTDSYPAPKTHTSRNPSGKKCSKGKKKLKSKKSKAHECPICNKIFRSGQALGGHKRSHFVGGSDENTLVIRPGAASVPCLIDLNLPAPVDE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1421 474 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Apr7g1421 474 MobiDBLite consensus disorder prediction 119 144 - -
Apr7g1421 474 MobiDBLite consensus disorder prediction 399 413 - -
Apr7g1421 474 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 474 - -
Apr7g1421 474 ProSiteProfiles Zinc finger C2H2 type domain profile. 419 441 IPR013087 -
Apr7g1421 474 MobiDBLite consensus disorder prediction 374 413 - -
Apr7g1421 474 MobiDBLite consensus disorder prediction 119 177 - -
Apr7g1421 474 SUPERFAMILY beta-beta-alpha zinc fingers 95 441 IPR036236 -
Apr7g1421 474 SMART c2h2final6 419 441 IPR013087 -
Apr7g1421 474 SMART c2h2final6 6 28 IPR013087 -
Apr7g1421 474 SMART c2h2final6 94 116 IPR013087 -
Apr7g1421 474 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Apr7g1421 474 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 474 - -
Apr7g1421 474 MobiDBLite consensus disorder prediction 163 177 - -
Apr7g1421 474 Gene3D Classic Zinc Finger 1 63 - -
Apr7g1421 474 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Apr7g1421 474 SUPERFAMILY beta-beta-alpha zinc fingers 2 33 IPR036236 -
Apr7g1421 474 MobiDBLite consensus disorder prediction 30 59 - -
Apr7g1421 474 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Apr7g1421 474 MobiDBLite consensus disorder prediction 30 44 - -
Apr7g1421 474 MobiDBLite consensus disorder prediction 381 398 - -
Apr7g1421 474 ProSitePatterns Zinc finger C2H2 type domain signature. 421 441 IPR013087 -
Apr7g1421 474 Pfam C2H2-type zinc finger 6 31 - -
Apr7g1421 474 Pfam C2H2-type zinc finger 96 118 - -
Apr7g1421 474 Pfam C2H2-type zinc finger 418 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1421 Apr-Chr7 21317794 21319317 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr7g1421 zf-C2H2_6 3.4e-07 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1421 7 21317794 21319317 Apr7g1421 7 21317794 21319317 ECH