Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1405 ATGGCCAAAAGAGTTGTGTACAGAGCATTCTCCTCAACTCCTGAAATTCCAAGCCTTTATTCCTTTCTACAACCATCAGTGTTTGCCCTCACAAAATGCAAAAACAAACGACAACCCATTTCTGAAGAACCTCAAAAGCTTCCAACTTCACCACGACAGTCTCTTTTCCTCACTCCTGATCAAATCTCCACCTTGCAAACGACCCTTCACAAGTCTCTCATAACCAGTGACACTGATGAGGCTTGGAAGTCCTTCAAGACCCTCACCACCCACCAAACCTTTCCACCTAAACCCCTCACCAATTCCCTCATCACTCACTTGTCCTCTCTTGGTGACATCCACAACCTCAAGAGGGCTTTTGCCTCTGTGGTTTTTCTCATGGAGAAGAACCCTTTGGTGATTGACTTTGAAACCCTTCATTCCATGCTAGATTCCATGAAGAGTGCCAACACTGCTGCCCCTGCTTTTGCCCTTGTTAGGTGCATGTTCAAGAACAGGTTTTTTGTTCCTTTTAGTGTTTGGGGTAATGTGCTTGTTGAGATTAGTAGGAAGAATGGTAACCTTGCTGCTTTTCTGAGGGTTTTTGAAGAGAATTGTAGGGTTGCTTTGGAGGAGAAGATGGAGTTCATGAAACCTGATGTTGGTGCTTGTAATGCTGCACTTGAAGGTTGCTGTTTTGAACTTGAATCTGTGAGTGATGCTGAGAGGGTTGTTGGAATAATGTCAAATCTTGGTGTTAGGCCTGATGATTTGAGTTTTGGGTTTCTTGGTTATTTGTATGCACTCAAGGGGTTACAAGAGAAGATAAAAGAATTGGAGGTTTTGATGGGTGGGTTTGGTTGTTCAAACAAGAAGGGTTTCTATTCTAATTTGATTAGTGGGTATGTTAAGTCAGGAAATTTGGCTTCTGTGGAGTCAACTATTATTAAATGTCTGAATGATGAAGGTGGAAAAGATTGGAGTTTTGGTGTAGAAACTTTCTGTGAAGTTGTTAAGGCGTATTTTCAGAAAGTAAATATCAAGGGGTTAGCTAATTTGATTATTGAAGCTCAGAAGTTAGAGCCTTCAAATATCGTAGTTGATAAGTCTATAGGTTATGGTATTGTTAATGCATGTGTTAGTATGGGACTATCAGACAAAGCACACAGCATTCTTGATGAAATGAATGCTCTGGGAGCCTCTGTTGGTCTCGGGGTCTATGTACCAATCTTGAAGGCTTACTGCAAAGAAAATAGAACTGTTGAGGCTACTCAATTGGTGATGGAGATTAGTAATTCTGGTCTGCAGTTGGATGTGGAAACCTATGATGCTTTGATAGAAGCAGCCATGTGCAGCCAAGATTTTCAGTCAGCATTTTCCCTGTTCAGGGACATGAGAGAAGCAAGGATTCCTGATTTGAAAGGGAGTTACTTGACTATAATGACAGGTTTGATGGAGAATCATCGGCCTGAGTTGATGGCAGCTTTCTTAGATGAGGGGGTTGAGGATCCTCGGATTGAAGTAGGTACGCATGATTGGAATTCTATCATCCATGCTTTCTGTAAAGCTGGGAGACTTGAAGATGCAAGAAGGACTTTTAGAAGGATGACATTCCTGCAATTTGAGCCAAATGATCAAACATACTTGTCCATGATTAATGGATATGTCTTGGCTGAGAAGTATTTTGTTGTGTTGATGTTGTGGAATGAGGTTAAGCGAAAGCTATCAACGGATGGGCAGAAAGGGATCAAGTTTGACCACAATCTGGTTGATGCTTTCCTGTATGCCATGGTCAAGGGAGGTTTCTTTGATGCTGTTATGCAAGTTGTACAGAAAGCTAATGAGATGAAAATTTTTGTTGACAAGTGGAGATACAAGCAAGCATTCATGGAGACCCATAAAAAGCTCAAAGTTGCAAAGTTAAGAAAAAGAAATTTTAGAAAAATGGAAGCACTTATTGCTTTCAAGAACTGGGCTGGGTTAAATACATGA 1971 0.4105 MAKRVVYRAFSSTPEIPSLYSFLQPSVFALTKCKNKRQPISEEPQKLPTSPRQSLFLTPDQISTLQTTLHKSLITSDTDEAWKSFKTLTTHQTFPPKPLTNSLITHLSSLGDIHNLKRAFASVVFLMEKNPLVIDFETLHSMLDSMKSANTAAPAFALVRCMFKNRFFVPFSVWGNVLVEISRKNGNLAAFLRVFEENCRVALEEKMEFMKPDVGACNAALEGCCFELESVSDAERVVGIMSNLGVRPDDLSFGFLGYLYALKGLQEKIKELEVLMGGFGCSNKKGFYSNLISGYVKSGNLASVESTIIKCLNDEGGKDWSFGVETFCEVVKAYFQKVNIKGLANLIIEAQKLEPSNIVVDKSIGYGIVNACVSMGLSDKAHSILDEMNALGASVGLGVYVPILKAYCKENRTVEATQLVMEISNSGLQLDVETYDALIEAAMCSQDFQSAFSLFRDMREARIPDLKGSYLTIMTGLMENHRPELMAAFLDEGVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSMINGYVLAEKYFVVLMLWNEVKRKLSTDGQKGIKFDHNLVDAFLYAMVKGGFFDAVMQVVQKANEMKIFVDKWRYKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNT* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1405 656 Pfam PPR repeat family 506 548 IPR002885 -
Apr7g1405 656 Pfam Pentatricopeptide repeat domain 419 463 IPR002885 -
Apr7g1405 656 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 248 IPR002885 -
Apr7g1405 656 Gene3D Tetratricopeptide repeat domain 176 344 IPR011990 GO:0005515
Apr7g1405 656 PANTHER OS01G0788900 PROTEIN 7 656 - -
Apr7g1405 656 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Apr7g1405 656 Gene3D Tetratricopeptide repeat domain 394 464 IPR011990 GO:0005515
Apr7g1405 656 TIGRFAM PPR: pentatricopeptide repeat domain 506 537 IPR002885 -
Apr7g1405 656 Gene3D Tetratricopeptide repeat domain 465 625 IPR011990 GO:0005515
Apr7g1405 656 Pfam PPR repeat 288 305 IPR002885 -
Apr7g1405 656 Pfam PPR repeat 369 390 IPR002885 -
Apr7g1405 656 PANTHER BNAC05G43320D PROTEIN 7 656 - -
Apr7g1405 656 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 502 536 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1405 Apr-Chr7 21192734 21195648 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1405 7 21192734 21195648 Apr7g1405 7 21192734 21195648 ECH