LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr7g1396	ATGGATCGGAGTTCCTTCTCATCCGGAACCCGGAAAATCCGATCCAAATCCGATATATACTCCACCTTCGTGGTCCACGACGATGTCGACGACGACGGAGCATCCAACCGCAGGCGTAAGGCCGGAGGCGCTCATTCACAGGACGATCCCTACGCGACAATGGTGTACAAAGACAACGGCCACGACGGTGATGACGACGATGACGAATACTCTTCTCTCCCTCCGCTTCTCAAGCACCTGCCCAAGGATTTCGGCGGCGGAGCGCCGCTGGACTACGATGACGTCGACGACGACGACGAAGACTCCGGCGATTTTGGCACCGTAATCGTGAAGTCCGATCGGAGCCGGCAGCGCGATCGATCTTCTTCCGGCGTGGCTTCGTCGGCGGGCTCGACCTGGAAGGCTCAGAGCTCAACGCAGGCGAGCCCTTTGAACAGGTTCGGCGGCGGTGACGAAAGCGACGACGGTGACCATGACGGCGGCGGGTTTTCAACCTTCGTCGTGCGCTCAACGGTGAGGTCCGGCGAGAGAGAGTCGGTAAGCGGAACCGTGTTGCGACGGACGAGCGGCGGTAGTGGCGGCGGTTCGACGATGGAGAGAGCTGTGGCGAGTATGCAAGCGATGGGAGATTTTGGATTTGGAAAGCAGAGGAAAGGAAGTGGATCCTCGCAGAACGATGAGGGAAGGCAACATTCGATAACGACTAAGGTTTCGTCGAGTTCAATCCCTGATAGTGTTATCAGAGAGGACCCTACGACAAAATACGAATTGCTTAATGAACTTGGGAAGGGGTCCTATGGAGCTGTTTACAAAGCTAGGGATTTGAGAACCTCGGAGATGGTTGCTATCAAAGTAATATCGTTATCGGAAGGGGAGGAGGGATATGAGGAAATCCGCGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAACGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATTCTGTGGTGGTGGTAGTGTTGCTGATCTGATGAATGTGACTGAGGAACCACTGGATGAGGGTCAAATAGCATATATCTGCAGAGAAGCACTGAAGGGACTTGAATACTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTGTTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCGGAAGTTATTCAAGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCTGAGGGTGTTCCTCCAAGATCAGATGTACATCCAATGAGGGTTTTATTCATGATATCAATAGAACCTGCTCCGATGCTTGAAGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAGTGCCTAACAAAAGAACCTCGTCTCCGCCCTACTGCATGTGAGATGTTGAAGCACAAATTCTTTGAAAAATGTAAAACTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCAATGGCTTTGCAGGTGCAAACTCTTGCTCCAGCTGCATCAGGAGATCAGTTAGCTTCAAAGCTAAATGATGAATACGGAGATACTGTTCCATCCAGACCTCTTAACATAGGTGTAGAGGGGGGTGCTGATCTCTCATCACATGGCACTATGAGGAAGCTGCAAAAGGGGGAAGATGTAGACATGAGTGAAGGGAACTTTGGCACTGTAATAGTCCATGGAGATGCATCACATAAGACCACACATGATGTAGATTCTGAAGTTTCCTTGTCTGCTCTGACCAGTGGCACAGGAGGCAGATTAGCTGACCCTGGGATTGAGAGTCAAAAAGTTGGTGTCACAAATACAGCTTCTTTCAGAGGATCTAGTCATCCTACCAATACCATACATTCAACTTTACCTTACATTACTAATTCAACTGAGCAGAACCTCAAAACAAAAGGTAGTCATCGAGCACAAGCTGGAGTTGGTAGTGATATAAGCAATAACATATTCAAGAATGAAACAGTCAGCCGCAGATCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACAGTGCCCATACCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTGTCAGACAATGTGCTCGGTGGCCTGCAACAGGATACCAGTGGAACTGGAACAGTAGAAGCATTGCAAGAGCTTTTTAGTGGTGACGGACAGTCCAAAAAGTGTCGGAGAGGACTTAATGAGATGCCTCTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATCTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGCTGCAAGCGATCCAGGAACAGCGGACTATTCAAAATCTCTCTGACACACTTCGAACTATTCTTCGGTTGTAA	2520	0.4742	MDRSSFSSGTRKIRSKSDIYSTFVVHDDVDDDGASNRRRKAGGAHSQDDPYATMVYKDNGHDGDDDDDEYSSLPPLLKHLPKDFGGGAPLDYDDVDDDDEDSGDFGTVIVKSDRSRQRDRSSSGVASSAGSTWKAQSSTQASPLNRFGGGDESDDGDHDGGGFSTFVVRSTVRSGERESVSGTVLRRTSGGSGGGSTMERAVASMQAMGDFGFGKQRKGSGSSQNDEGRQHSITTKVSSSSIPDSVIREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEFCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTACEMLKHKFFEKCKTGSAAMLPKLEKARQIRASMALQVQTLAPAASGDQLASKLNDEYGDTVPSRPLNIGVEGGADLSSHGTMRKLQKGEDVDMSEGNFGTVIVHGDASHKTTHDVDSEVSLSALTSGTGGRLADPGIESQKVGVTNTASFRGSSHPTNTIHSTLPYITNSTEQNLKTKGSHRAQAGVGSDISNNIFKNETVSRRSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGLQQDTSGTGTVEALQELFSGDGQSKKCRRGLNEMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQAIQEQRTIQNLSDTLRTILRL*	840

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	27	45	-	-
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	211	248	-	-
	Apr7g1396	839	SUPERFAMILY	Protein kinase-like (PK-like)	235	525	IPR011009	-
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	217	247	-	-
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	27	198	-	-
	Apr7g1396	839	Pfam	Protein kinase domain	255	509	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	121	146	-	-
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	560	580	-	-
	Apr7g1396	839	ProSiteProfiles	Protein kinase domain profile.	255	509	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g1396	839	Gene3D	Transferase(Phosphotransferase) domain 1	251	541	-	-
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	104	120	-	-
	Apr7g1396	839	ProSitePatterns	Protein kinases ATP-binding region signature.	261	284	IPR017441	GO:0005524
	Apr7g1396	839	CDD	STKc_MAP4K3_like	254	509	-	-
	Apr7g1396	839	SMART	serkin_6	255	509	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g1396	839	MobiDBLite	consensus disorder prediction	167	195	-	-
	Apr7g1396	839	PANTHER	SERINE/THREONINE-PROTEIN KINASE TAO	196	829	-	-
	Apr7g1396	839	PANTHER	SERINE/THREONINE-PROTEIN KINASE TAO	196	829	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr7g1396	Apr-Chr7	21081298	21095594	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Pl	Apr7g1396		Pkinase	7.3e-69	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr7g1396	7	21081298	21095594	Apr7g1396	7	21081298	21095594	ECH