Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1322 ATGTGTTTGTGTGGCAAGCAACTAAGAAGTGTTGTAGTCTTGCAAGGAACATTTCTCAGTGGAAGAATGAGGTATTGTAATTTTCTACCTTCGAAAATGTGTTACCGCCTAAAGCATAAGTTCGCAGAGAACAAGTTTGTGAGAGGTGAAAGAAGCGGTTCCAAGTTGCGGAATAAGGTATTTGCTCTTATGGATTATAACCTTCCTGACCTAATTGGAAATGGAAGGGGTGAAACGAAATCTGAAATGAGTATGAGAGATGCATTGGATGATTTGGAGATCTCCTTGATATGTAAGAGATTTCCATCTATTACTTTGGGTACCGCTCCTCAAGTGGATTTATATGATGGGACCGTGTCATGTTCTGAAACGACAAACTCTTTAGCAACAGAAACTTTTGAACATTATTTTTCTGATTCTTCAGAGGCAAGGTGGGTGCAAAGCACTCTTTCTGAGGCATTTCCTTCTTTGTATGTCAATGATTCTAGTGTAGCATCTTCCACATTAAGAGAAGAAGATTCTTGTCAGTTGCCGCCTCATTCAGTGTCTTCAATGTATGAAGAAAAATTGGATCAAGTAACTGCAGAAGATTCTAAAATGGAAGTGGGGATGCAGTCACAGTCAAACCTTACACCCAATGAGTTATTGCTTGACAAATCTGTAAGTTGCATACCTGGATTAACTAAGAGGCAATGCCGACAGCTAGAAAACTGTGGGTTTCACACGTTACGGAAGTTGCTGCATCACTTTCCTCGATCATATGCCAATCTGCAGAATGCACATGCTAAAATTGATGACGGGCAATATTTGATTTTTGTTGGAAAAGTCTTATCCTCAAGGGGTATCAAAGCTAATTGTTCATTTTCATTTCTTGAGGTGATTGTGGGATGTCAGATTGCAGAAAGTGAACCTGCTTCTGAGCATGTGACTAGTGATGCTAGTGATGTGCAGGAGAAGACAATTTATTTGCATCTGAAGAAATTTTTTCGTGGCTCACGATTTACCTTTAAACCTTTCCTTAAAAGCCTAGCAGAAAAGTATCAAGAGGGAGATGTAGCATGTGTCAGTGGGAAGGTCAAGACTATGCGTGCTAAAGATCACTATGAGATGAGAGAATATAATATTGATGTGCTTGAAGATGGAAAAGATTTATCCTTTTTTGCTAAAGAGAGGCCATATCCTATCTACCCTTCAAAAGGACGTTTGAACCCAATTTTTCTTAGGGACATTATTACAAGGGGTTTACAAGCATTGCCTTTCAATGTTGATCCCATTCCTAAGGATATCACAGAGCAATTTGGATTGTTAAGTCTTCATGATGCATATTTTGGAATCCACAAACCGAAAGATATAAATGAAGCTGATTTGGCTCGCAAAAGACTCATATTTGATGAGTTTTTTTACCTACAGTTAGGACGCTTGTTCCAAATGCTCGAAGGTCTTGGTACACAAATAGAAAAGGATGTATTGCTAGATAAGTATAGAAGACCCAAAAATAATGCTGTGTGTACAGAAAAATGGTCGTCTCTCACCAAGATGGTTTTGGAGGTCCTTCCATATACTCTTACTTCTAGTCAACTGCATGCTGTTTCAGAGATTATTTGGGATCTAAAACGACCAGTTCCAATGAATCGGCTTCTGCAGGGTGATGTTGGATGTGGAAAAACTGTTGTAGCTTTTCTTGCATGCATGGAGGTTATTGGCTCTGGCTATCAGGCTGCCTTCATGGTTCCAACCGAGTTACTTGCAATCCAGCATTATGAACACTTGCTTAATTTGCTTGAAAAGTTGGATGAGTTCATTGGCAAGCCAACTGTTGCTTTATTAACAGGTTCGACCCCACTAAAACAAACACGGATGATTCGTAAGGGTATTCAGACTGGAGAAATCTCGATGGTCATAGGAACCCACAGTTTGATTGCAGAAAGTGTGGAATTCTTAGCCTTGCGCATTGCTGTGGTGGATGAGCAGCATCGCTTTGGTGTGATTCAAAGAGGAAGGTTTAACAGTAAGTTATATTGTGCATCTCCAAACATGGAAGATGCCGTTACAGATGAGTCCTCAAAGAATGATGGTTCCATGGCTCCGCATGTTCTTGCAATGTCTGCTACTCCTATTCCAAGGACACTTGCACTTGCTTTATATGGTGATATGTCATTGACACAGATAACTGACTTACCTCCTGGAAGAATTCCTGTTCAAACATTTACCATTGAAGGAAATGACAAAGGATTTGAGGATGTCTACAAGATGATGCTGGATGAATTGGAAGATGGGGGGAAAGTTTATCTTGTCTACCCAATTATTGAACTTTCTGAGCAGCTACCTCAGCTTCGTGCTGCTTCTGCAGATCTTGAAGTTATATCATGCCGGTTTCAAGGATACAATTGTGGCTTATTACATGGAAAAATGAAAAGTGATGAAAAAGAAGAAACTTTAAGAAAGTTCAGGACTGGAGAAATACATATACTACTTGCCACTCAAGTAATTGAGATTGGTGTTGATGTTCCAGATGCATCTATGATGGTTGTGATGAATTCTGAAAGATTTGGAATTGCCCAATTACACCAGCTCAGAGGGCGAGTTGGACGTGGATCAAGGCCATCAAAATGTATACTAGTAGCATCAACTGCAAGTAGCCTAAATCGTTTGAAAGTACTAGAGCAATCATCGGATGGATTTTATCTGGCTAATATGGACCTTTTATTGCGGGGACCTGGTGACTTGCTTGGAAAGAAACAATCTGGACATCTTCCTGAGTTTCCTGTTGCCAGATTGGAAGTTGATGGAAATATTTTACAAGATGCACATGTGGCTGCACTGAAAATTTTAACTGCGTCCCATAATTTGGAGCAATTTCCAGCACTTAAATTGGAGCTTAGCATGAGACAGCCACTTTGCCTACTAGGTGATTGA 2916 0.3999 MCLCGKQLRSVVVLQGTFLSGRMRYCNFLPSKMCYRLKHKFAENKFVRGERSGSKLRNKVFALMDYNLPDLIGNGRGETKSEMSMRDALDDLEISLICKRFPSITLGTAPQVDLYDGTVSCSETTNSLATETFEHYFSDSSEARWVQSTLSEAFPSLYVNDSSVASSTLREEDSCQLPPHSVSSMYEEKLDQVTAEDSKMEVGMQSQSNLTPNELLLDKSVSCIPGLTKRQCRQLENCGFHTLRKLLHHFPRSYANLQNAHAKIDDGQYLIFVGKVLSSRGIKANCSFSFLEVIVGCQIAESEPASEHVTSDASDVQEKTIYLHLKKFFRGSRFTFKPFLKSLAEKYQEGDVACVSGKVKTMRAKDHYEMREYNIDVLEDGKDLSFFAKERPYPIYPSKGRLNPIFLRDIITRGLQALPFNVDPIPKDITEQFGLLSLHDAYFGIHKPKDINEADLARKRLIFDEFFYLQLGRLFQMLEGLGTQIEKDVLLDKYRRPKNNAVCTEKWSSLTKMVLEVLPYTLTSSQLHAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAIQHYEHLLNLLEKLDEFIGKPTVALLTGSTPLKQTRMIRKGIQTGEISMVIGTHSLIAESVEFLALRIAVVDEQHRFGVIQRGRFNSKLYCASPNMEDAVTDESSKNDGSMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVQTFTIEGNDKGFEDVYKMMLDELEDGGKVYLVYPIIELSEQLPQLRAASADLEVISCRFQGYNCGLLHGKMKSDEKEETLRKFRTGEIHILLATQVIEIGVDVPDASMMVVMNSERFGIAQLHQLRGRVGRGSRPSKCILVASTASSLNRLKVLEQSSDGFYLANMDLLLRGPGDLLGKKQSGHLPEFPVARLEVDGNILQDAHVAALKILTASHNLEQFPALKLELSMRQPLCLLGD* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1322 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 727 920 IPR027417 -
Apr7g1322 971 CDD DEXHc_RecG 461 727 - -
Apr7g1322 971 Gene3D - 475 724 IPR027417 -
Apr7g1322 971 Pfam Helicase conserved C-terminal domain 749 865 IPR001650 -
Apr7g1322 971 Gene3D - 733 904 IPR027417 -
Apr7g1322 971 PANTHER ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC 17 971 - -
Apr7g1322 971 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 17 971 - -
Apr7g1322 971 SMART helicmild6 769 866 IPR001650 -
Apr7g1322 971 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 747 902 IPR001650 -
Apr7g1322 971 Pfam DEAD/DEAH box helicase 544 708 IPR011545 GO:0003676|GO:0005524
Apr7g1322 971 SUPERFAMILY Nucleic acid-binding proteins 217 418 IPR012340 -
Apr7g1322 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 727 IPR027417 -
Apr7g1322 971 TIGRFAM recG: ATP-dependent DNA helicase RecG 238 939 IPR004609 GO:0003678|GO:0006281|GO:0006310
Apr7g1322 971 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 536 723 IPR014001 -
Apr7g1322 971 Pfam ATP-dependent DNA helicase RecG, domain 3, C-terminal 891 950 IPR045562 -
Apr7g1322 971 SMART ultradead3 518 734 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1322 Apr-Chr7 20304816 20321141 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1322 7 20304816 20321141 Apr7g1322 7 20304816 20321141 ECH