Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1305 ATGGATTTAGTTTTCCATCGTTTATTCCATCCCTTTGTAATCGATTTCAACCTCTCTGGTTCAGAAATGGCAATAAGTACTAGTGGAGAAGAGCTTAGAATACGCTATGATCACGTGTCCACCTCTGTGTCACGGGAAGATTGCGCTGTGTGTCTTTGCAATATGGGAGAAACAGAAGAGGTTATAACGCTGCGCTGTGATCATCTCTTTCACAGAGTTTGCATAGATAAATGGGTTGGCTTCAACAGTGCCACTTGCCCTCTTTGCAGACACTCAATGGGGCCAACAAAGGAAATCGGAAAGTTAAGTGCTGAAATTCAATTATTTGAGTCTTGTTCTATCAACCCCCATGACTATGAGATCAAGTGGTTACGCTGA 378 0.4259 MDLVFHRLFHPFVIDFNLSGSEMAISTSGEELRIRYDHVSTSVSREDCAVCLCNMGETEEVITLRCDHLFHRVCIDKWVGFNSATCPLCRHSMGPTKEIGKLSAEIQLFESCSINPHDYEIKWLR* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1305 125 PANTHER RING ZINC FINGER PROTEIN-RELATED 30 103 - -
Apr7g1305 125 Pfam Ring finger domain 47 90 IPR001841 -
Apr7g1305 125 PANTHER EMB|CAB89405.1-RELATED 30 103 - -
Apr7g1305 125 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 98 IPR013083 -
Apr7g1305 125 SMART ring_2 48 89 IPR001841 -
Apr7g1305 125 SUPERFAMILY RING/U-box 42 96 - -
Apr7g1305 125 ProSiteProfiles Zinc finger RING-type profile. 48 90 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1305 Apr-Chr7 20137566 20137943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1305 47 106 C3H Transcription Factor Family AT2G04240 38.333 2.64e-11 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1305 7 20137566 20137943 Apr7g1305 7 20137566 20137943 ECH