Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1302 ATGTCAAGCGCGTCGCCGTCACCGGCTGCGCCACCGCCACAAACACCTCCCTCCTCCACTACTAGTCCCTCACCGTCCACCACCACCACCACCACCAATCCGCCGCCGCAACAACCACCACCTTCTTCCCCTTCACCACCGCCTTCAACCCCACCTCCGGCCACCCCATCAACTCCACCTCCGGCCACCCCCTCAACCCCACCTCCGGCCACCCCATCAGCTCCTCCTCCAGCTGCTCCGCCTTCACAACCGCCGCGGTCTCCACCTCCCCTCATGTCTGGAGCCTCACCTCCACCGTCATCCCCTCCCCCACCATCACCACCGCCATCTCCTCCGGCAAGGCCACCGCAGTCGCCGTCGGTTCCGCCAAGAAGATCTCCACCACCGCCATCAGCACCAGTTTCATCTAGAGCCCCTCCACCCCCGCCACAACCATCAGCTCCACCGTCACCACAACCACAACCATCAGCTCCACCACCGTCATCACCGCCGCCGCAGAATTCACCGCCTCCTCCGGTCACCGTGCCACCAACCCCAGCTTCGCCTCCTCCGCCACCGTCTGCGCCACCCATCGGTTCACCTCCACCATCACCGGCTGCACTGCCCCCAAGAAACCCTCCGCCACCGGATAATTCATCATCACCACCGGTGCCTGTGCTGCCACCGAAGTCATCGCCGCCATCACCATCACCCACCCCTCCTAGGATTAGTCCTAATTCCCCTCCAAGTTCTCAAGCAGCTCCACCTTCAAATTCAACACTGAGGTCATCCCCACCACCACCACCAATTGTTGAAGTGGCCCCGCCACCGCCTTCGCGTGCTTCATTGCCGCCCTCGCCGAACAGTACAGAAAACACAAGCCCTGTTGGTGGTGGAGGAGGTAGTGGTGGAATTAGCACTGGTGCTGTGGTGGCTATTAGTGTGGTGGCTGGAATTTTGGTGCTTTGTTTCATTGGGATTGCGATGTGGTGCATGAGGAGGCAAAAGAGAAAGGTGCCTCCTAACGGTGGTTATGTCATGCCATCCACCCTTGCCTCATCTCCCGAATCAGATTCATCCTTTTTTAAGACACATTCTTCAGCTCCTCTTGTACAAAGTGGCTCTGGCAGTGATGTTGTGTATACACCATCTGACCCTGGTGGACTTGGCAACTCAAGGTCATGGTTTTCATATGAAGAACTAATCAGGGCCACAAATGGCTTCTCTACTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATACCTTCCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAAATTGGTGGAGGTCAGGGGGAGAGAGAATTCAAAGCTGAGGTTGAAATTATTAGTCGCATACATCATCGCCATTTGGTTTCTTTAGTGGGATACTGCATTCAAGACGACAGAAGACTACTTGTCTATGACTATGTTCCTAACAATACGCTTTATTTCCATCTACATGGGGAAGGTCGGCCTGTGCTAGAATGGGCAAACCGTGTTAAAATTGCAGCCGGTGCAGCTCGAGGGATAGCTTATCTCCATGAAGATTGCAACCCTCGGATTATTCACAGGGATATAAAGTCATCAAACATTCTTTTGGATTACAATTACGAAGCTCGGGTCTCGGATTTTGGGCTAGCCAAATTAGCCCTTGATGCAAATACGCATGTAACCACACGAGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCATCAAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTTGTGCTTTTGGAGCTCATTACCGGACGGAAGCCAGTAGATGCATCCCAACCCTTGGGAGATGAAAGCCTAGTTGAATGGGCTCGACCTCTGCTGAGTCATGCAATTGATACTGAGGAATTTGATAGTTTGGCAGATCCAAGGCTGGAAAAGAACTTTGTTGAGAGTGAATTGTATTGCATGATTGAAGTTGCTGCTGCTTGTGTGCGGCACTCAGCAGCAAAGAGACCCCGTATGGGACAGGTTGTTAGAGCTTTTGATAGCTTGGCAGGTTCTGATCTAACTAACGGAATGAGACTTGGGGAAAGCGAGGTGTTTGACTCTGCGCAGCAATCTGAAGAAATAAGATTATTTCGGAGGATGGCATTTGGTAGTCAAAATTATAGCACAGACTTCTTTAGCCATGCTAGTTTGAATACATGA 2187 0.5203 MSSASPSPAAPPPQTPPSSTTSPSPSTTTTTTNPPPQQPPPSSPSPPPSTPPPATPSTPPPATPSTPPPATPSAPPPAAPPSQPPRSPPPLMSGASPPPSSPPPPSPPPSPPARPPQSPSVPPRRSPPPPSAPVSSRAPPPPPQPSAPPSPQPQPSAPPPSSPPPQNSPPPPVTVPPTPASPPPPPSAPPIGSPPPSPAALPPRNPPPPDNSSSPPVPVLPPKSSPPSPSPTPPRISPNSPPSSQAAPPSNSTLRSSPPPPPIVEVAPPPPSRASLPPSPNSTENTSPVGGGGGSGGISTGAVVAISVVAGILVLCFIGIAMWCMRRQKRKVPPNGGYVMPSTLASSPESDSSFFKTHSSAPLVQSGSGSDVVYTPSDPGGLGNSRSWFSYEELIRATNGFSTQNLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIQDDRRLLVYDYVPNNTLYFHLHGEGRPVLEWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNYEARVSDFGLAKLALDANTHVTTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHAIDTEEFDSLADPRLEKNFVESELYCMIEVAAACVRHSAAKRPRMGQVVRAFDSLAGSDLTNGMRLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSHASLNT* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1302 728 Gene3D Phosphorylase Kinase; domain 1 381 476 - -
Apr7g1302 728 MobiDBLite consensus disorder prediction 253 277 - -
Apr7g1302 728 PRINTS Proline rich extensin signature 9 25 - -
Apr7g1302 728 PRINTS Proline rich extensin signature 32 44 - -
Apr7g1302 728 PRINTS Proline rich extensin signature 48 69 - -
Apr7g1302 728 MobiDBLite consensus disorder prediction 1 20 - -
Apr7g1302 728 ProSitePatterns Protein kinases ATP-binding region signature. 407 429 IPR017441 GO:0005524
Apr7g1302 728 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1302 728 Pfam Protein tyrosine and serine/threonine kinase 403 672 IPR001245 GO:0004672|GO:0006468
Apr7g1302 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Apr7g1302 728 Gene3D Transferase(Phosphotransferase) domain 1 477 688 - -
Apr7g1302 728 MobiDBLite consensus disorder prediction 278 293 - -
Apr7g1302 728 MobiDBLite consensus disorder prediction 29 245 - -
Apr7g1302 728 MobiDBLite consensus disorder prediction 1 294 - -
Apr7g1302 728 SMART serkin_6 401 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1302 728 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 119 723 - -
Apr7g1302 728 CDD STKc_IRAK 407 677 - -
Apr7g1302 728 PANTHER BNACNNG34790D PROTEIN 119 723 - -
Apr7g1302 728 SUPERFAMILY Protein kinase-like (PK-like) 383 672 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1302 Apr-Chr7 20103911 20110088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1302 295 720 Trihelix Transcription Factor Family AT1G70460 55.435 8.69e-178 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr7g1302 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1302 7 20103911 20110088 Apr7g1302 7 20103911 20110088 ECH