Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1300 ATGGTGGATTTGGAAAGGAGAAGAATGAGGGGTGAAAGGAGAAGGAAGTTGCATCTTAGCAAGATCTATTCATTTGCATGTGGGAAACAATCTTTGAAGAGGGATCATTCACAGATTGGAGGGCGAGGGTACTCAAGGGTGGTGTTTTGCAATGAACCAGAGAGTTTCGAGAGTGGGATAAGGAATTATGCTGATAATTCTGTGAGGTCCACAAAGTATACTCTTGCTACTTTCTTGCCTAAGTCACTTTTCGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTAACTGGCATCTTGTCCTTTACAAAGCTTGCTCCTTATACAGCTGTCAGTGCTATCTTTCCTCTCATTGTTGTTATTGGGGCTACTATTGTCAAAGAAGGTATTGAAGATTGGAGTAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAATTAAAGTGCATAAAGGGCATGGAACTTTTGAATATACTGAGTGGAAGAATCTAAAGGTGGGGCATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCAGACCTCCTACTTCTTTCATCCAGTTACGAGGATGCAGTTTGCTATGTTGAAACCATGAATTTGGACGGGGAGACAAATTTGAAGTTAAAACAAGGTTTGGAAGTAACTTCTTCCTTACATGAGGACTTTCAATTCAGTGATTTTAAAGCTACAATCAAATGTGAAGACCCAAATGCAAATTTATATTCATTTGTTGGGAGTATGGAGTTTGAAGAACAACAACGTCCTCTTTCTCCTCAGCAACTTCTTCTAAGAGACTCCAAACTTCGTAACACAGAGTACATATTTGGAGCTGTCATCTTCACTGGTCATGACACAAAGGTCATTCAAAATTCTACCGCTCCCCCTTCAAAGAGAAGCAAAATTGAGAAGAAGATGGATAGGGTTATCTACTTCTTGTTTTGTATTTTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTATAACTAAAGATGACTTGGACAACGGGTCGATGAAAAGATGGTACCTTAGACCAGATGATTCTACAATTTTCTTTGATCCTAAAAGAGCACCCGCTGCTGCTATATATCATTGTTTGACAGCCTTGATGTTATATGGCTTCTTCATTCCTATTTCATTATATGTGTCAATAGAAATTGTTAAAGTCCTTCAGAGTATCTTCATCAATCAAGATATCAATATGTACTATGAAGAAGCAGACAAACCGGCCCATGCCCTTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTCACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGCTCTATTGCTGGGATAGCATATGGCCGTGGTGTTACAGAGGTCGAGAGGGCCATGAATAGAAGAAATGGTTCTCATTTGATTGATGAGACCAAGGAAACTCCAGATAGAAAAGCACCCATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAATGGAAACTGGGTTAATCAGCCTAGTGCAAATGTTATCCAGAATTTTTTTCGCTTATTGGCAATCTGCCATACAGCCATACCAGAAGTGGAAGATACAGGAAATGTCTCATATGAAGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCGAGAGAGATTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCTATGTATGTATTGGACCCAGTTTCTGGTAACAAAGTTGAAAGAACGTACAAACTTCTCAATGTTTTAGAATTCAATAGCACAAGAAAGCGAATGTCAGTGATAGTAAAAGATGAAGAAGGGAAAATTTGGCTACTCTGTAAAGGTGCTGACAGTGTCATGTTCGAGAGGCTTGCCAAGGATGGTAGGGAGTTTGAAGAGAAAACTTTGGAACATGTGCATGAATATGCTGATGCAGGTCTAAGGACCCTGATCCTGGCATATCGGGAACTTGATGAAGAACAATACAAGGCATTTGATGATAAATTTTATCAAGCAAGAAATTCAATTACTGAAGATCGGGAAACAAAGATTGAGGAAGTATCAGATAAGATTGAGAGGAATCTAATCCTTCTTGGGGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTCCCGGACTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATATGGGTTTTGACTGGGGATAAAATGGAGACTGCCATAAACATTGGGTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGAGACTCCTGAAATTCAAGCATTGGAGAAGGCTGGAGACAAGAGGACTATTGCTAAGGCTTCAAGAGAAAATATCCGCCATCAAATATCTGAAGGTGCTCAACAGCTTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTGCTTATGCTCTAGAAGATAATATCAAGAACATGTTTCTAGACCTTGCAATTCGTTGTGCATCTGTTATCTGCTGCCGCTCCTCACCAAAGCAGAAGGCACTGGTCACTAGACTGGTCAAGTCTGGAACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTCGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGTTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTATTTCTTCTACAAGAATATCACATTTGGCTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCCGGACAGCCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTTTTTTCAACACTTCCCGTGATTGCACTCGGGGTCTTTGACCAAGATGTATCCGCTCGGTACTGTCAGAAGTTCCCTATGTTATATCAAGAAGGTGTGCAGAATGTGCTCTTTAGCTGGCGTCGAATACTTGGTTGGATGCTTAACGGCTTTATTAGCGCGATAATAGTTTTCTTCTTCTGCACAAAGGCAATGGAGATTCAGGCCTTTGATGAGAAGGGAAGAACTGCTGGGAGGGATATACTAGGAGCAACAATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCACTTGCTATTAGTTACTTCACCTTGATTCAACATATTTTCATCTGGGGCTCCATTGCTCTCTGGTACCTTTTCCTCCTTGCATATGGTGCAATACCTCCCAGCATTTCGACAAATGCGTACAAAGTCTTCGTTGAAACTCTTGCTCCAGCTCCTTCCTTTTGGATTGTGATATTGTTTGTGGTGATATCAACACTTATCCCATACTTCTCTTACTCAGCAATACAGATGAGGTTCTTTCCCATGTATCATGAAATGGTACAGTGGATAAGGTATGAAGGGAAGACAAATGATCCTGAATTTTGCGCCATGGTGCGTCAAGGATCGTTGCGGCCAACGACCGTCGGCTCAACAGCTCGCTTAGCAGCCAAGGAGAATGACATTAGAGACAGTGCCACTAACCATAGATAG 3594 0.4051 MVDLERRRMRGERRRKLHLSKIYSFACGKQSLKRDHSQIGGRGYSRVVFCNEPESFESGIRNYADNSVRSTKYTLATFLPKSLFEQFRRVANFYFLVTGILSFTKLAPYTAVSAIFPLIVVIGATIVKEGIEDWSRKKQDIEVNNRRIKVHKGHGTFEYTEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLHEDFQFSDFKATIKCEDPNANLYSFVGSMEFEEQQRPLSPQQLLLRDSKLRNTEYIFGAVIFTGHDTKVIQNSTAPPSKRSKIEKKMDRVIYFLFCILFLMAFVGSIFFGIITKDDLDNGSMKRWYLRPDDSTIFFDPKRAPAAAIYHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDINMYYEEADKPAHALTSNLNEELGQVHTILSDKTGTLTCNSMEFIKCSIAGIAYGRGVTEVERAMNRRNGSHLIDETKETPDRKAPIKGFNFTDERIMNGNWVNQPSANVIQNFFRLLAICHTAIPEVEDTGNVSYEAESPDEAAFVIAAREIGFEFYKRTQTSLSMYVLDPVSGNKVERTYKLLNVLEFNSTRKRMSVIVKDEEGKIWLLCKGADSVMFERLAKDGREFEEKTLEHVHEYADAGLRTLILAYRELDEEQYKAFDDKFYQARNSITEDRETKIEEVSDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLETPEIQALEKAGDKRTIAKASRENIRHQISEGAQQLTASRGTSQQAFALIIDGKSLAYALEDNIKNMFLDLAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSTLPVIALGVFDQDVSARYCQKFPMLYQEGVQNVLFSWRRILGWMLNGFISAIIVFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMALAISYFTLIQHIFIWGSIALWYLFLLAYGAIPPSISTNAYKVFVETLAPAPSFWIVILFVVISTLIPYFSYSAIQMRFFPMYHEMVQWIRYEGKTNDPEFCAMVRQGSLRPTTVGSTARLAAKENDIRDSATNHR* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1300 1197 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Apr7g1300 1197 SFLD Haloacid Dehalogenase 416 915 - -
Apr7g1300 1197 SFLD p-type atpase 416 915 IPR044492 -
Apr7g1300 1197 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1142 IPR023298 -
Apr7g1300 1197 SUPERFAMILY HAD-like 420 908 IPR036412 -
Apr7g1300 1197 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1192 - -
Apr7g1300 1197 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 63 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr7g1300 1197 Gene3D - 700 904 IPR023214 -
Apr7g1300 1197 CDD P-type_ATPase_APLT_Dnf-like 65 1024 - -
Apr7g1300 1197 Pfam Cation transport ATPase (P-type) 523 625 - -
Apr7g1300 1197 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1192 - -
Apr7g1300 1197 Pfam Phospholipid-translocating P-type ATPase C-terminal 892 1142 IPR032630 -
Apr7g1300 1197 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 835 946 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr7g1300 1197 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Apr7g1300 1197 PRINTS P-type cation-transporting ATPase superfamily signature 864 883 - -
Apr7g1300 1197 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 701 IPR023299 GO:0000166
Apr7g1300 1197 Gene3D - 128 294 - -
Apr7g1300 1197 SUPERFAMILY Calcium ATPase, transduction domain A 154 291 IPR008250 -
Apr7g1300 1197 Gene3D - 542 699 IPR023299 GO:0000166
Apr7g1300 1197 Pfam Phospholipid-translocating ATPase N-terminal 48 114 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1300 Apr-Chr7 20079788 20088161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1300 17 1192 Primary Pumps ATPases AT1G68710 74.196 0.0 1894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1300 7 20079788 20088161 Apr7g1300 7 20079788 20088161 ECH