Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1295 ATGATGCCCCCTCAGCAAGAAACCACCATTACACCAAACATTCCGGCCATCCCAAACCGCTCGGAAAACAGCTCTGTCCATGCTGAACCACCACCTTCCTCCACCAACAACATTAAACCCACTTTAAGCAATGACATTCAGCACCATCCACCTCCTTCAGCCACAAGATTTTCCATTCTTCACCAATCCCTTCGTCCCGTTACCCTCAAATTTGAGGATGTTTCCTACAGCATAGACTTTGGAAGGGACAAGAATGGTTGTGTATCATCACAAAAGCCAAAGCTAACAAGGACGGTGTTGAATGGTGTGACGGGGATGGTGGGGCCAGGGGAGGTGATGGCAATGTTGGGTCCCTCAGGGAGTGGGAAAACCACCTTACTCACCGCCCTCGCCGGCCGTCTCGCCGGAAAACTCTCTGGCAACATCACATATAATGGCCACCCATTTTCTAGCTCCATGAGGCGTAACGTAGGGTTTGTGTCCCAAGATGACATGTTGTACCCTCACCTAACCGTGCTTGAGACTCTCACTTATGCTGCCATGTTGAAACTTCCCAAGAGTTTGAATAGGGAAGAAAAGATGGAGCAAGTTGAATTGGTCATTGTTGAACTAGGGCTGTCCCGGTGCCGGAACAGCCCGGTTGGCGGCGCCACCGCGTTGTTCCGGGGAGTTTCCGGCGGGGAGCGAAAGCGGGTCAGTATTGGGCAAGAAATGTTGGTGAACCCGAGTTTGTTGTTGCTGGATGAGCCGACGTCCGGCCTTGATTCCACCACAGCCCAGCGTATCGTGGCGGTGCTCAAGAGCCTGGCCCGCAGTGGCCGGACGGTGGTGACAACCATTCATCAGCCTTCAAGCCGGTTGTATTGGATGTTTGACAAGGTGGTGGTGTTGTCGGACGGGTACCCGGTTTATACCGGGCAAGCGGGTCGGGTCATGGATTATTTTGAGTCCATTGGGTTTGTACCCGCTTTCAATTTCATGAACCCGGCTGATTTTTTGCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAGACAGGATGATCAGATAGATCACCATGAGGATCAAGCATCAGTCAAACAGCTCCTAGTTTCATCCTATAAGAAAAACTTATACCCTCTTCTCAAACAAGAGATTCAACAGAATAATAGAGACCCAGGATTTTTTAACACAGGAACATCGAGAAGTTCTAAGAACCAATGGACCACAAGTTGGTGGGAGCAATTCAAGGTTCTGCTTAAGAGGGGTTTAAAGGAGAGGAGGCATGAATCTTATTCTGGCCTAAGGATTTTCCAAGTCTTGTCTGTCTCCATTCTCTCAGGACTTTTGTGGTGGCATTCTGATCCCTTACACGTACAAGATCAGGTTGGCTTGCTATTCTTCTTCTCCATCTTTTGGGGATTCTTCCCTCTATTTAATGCCATCTTTGCTTTCCCTCTGGACCGGCCAATGCTTATGAAAGAACGATCATCAGGCATGTACCACCTCTCCGCCTACTACATGGCACGAATGATTGGAGACTTGCCAATGGAGCTTGTGCTTCCAACCATATTTGTAACTATCACTTATTGGATGGGTGGTCTCAAGCCTTCTTTGGTTACATTTGTCTTAACCCTTTTGATCATGCTTTTCAATGTTCTTGTCTCTCAAGGAATAGGCCTAGCACTTGGTGCCATTCTAATGGATGTTAAACAGGCCACAACACTAGCTTCAGTGACCATGTTGGTGTTTCTTTTAGCTGGTGGCTACTACATTCAGCAAATGCCATCATTTATAGCTTGGTTGAAGTACATTTCTTTTAGTCACTATTGCTACAAGCTTCTAGTAGGAGTGCAGTACTCAGTAAATGAGGTCAATGAATGTGGACCAGGGTTGCATTGTAGGATAAGAGATTTTCCGGCCATAAAGTGTCTTGGACTTGATAGCTTGTGGGGAGATGTGGCTGTATTGGCTGTAATGTTGTTTGGATACAGAGTTGTGGCTTATCTTGCTTTGAGGATGGGGCTGCATCATTGA 2016 0.4752 MMPPQQETTITPNIPAIPNRSENSSVHAEPPPSSTNNIKPTLSNDIQHHPPPSATRFSILHQSLRPVTLKFEDVSYSIDFGRDKNGCVSSQKPKLTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLAGKLSGNITYNGHPFSSSMRRNVGFVSQDDMLYPHLTVLETLTYAAMLKLPKSLNREEKMEQVELVIVELGLSRCRNSPVGGATALFRGVSGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVAVLKSLARSGRTVVTTIHQPSSRLYWMFDKVVVLSDGYPVYTGQAGRVMDYFESIGFVPAFNFMNPADFLLDLANGIVADVRQDDQIDHHEDQASVKQLLVSSYKKNLYPLLKQEIQQNNRDPGFFNTGTSRSSKNQWTTSWWEQFKVLLKRGLKERRHESYSGLRIFQVLSVSILSGLLWWHSDPLHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLMKERSSGMYHLSAYYMARMIGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPSFIAWLKYISFSHYCYKLLVGVQYSVNEVNECGPGLHCRIRDFPAIKCLGLDSLWGDVAVLAVMLFGYRVVAYLALRMGLHH* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1295 671 Gene3D - 69 318 IPR027417 -
Apr7g1295 671 Pfam ABC-2 type transporter 281 346 IPR043926 GO:0140359
Apr7g1295 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 668 - -
Apr7g1295 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 324 IPR003439 GO:0005524
Apr7g1295 671 Pfam ABC-2 type transporter 407 613 IPR013525 GO:0016020|GO:0140359
Apr7g1295 671 MobiDBLite consensus disorder prediction 1 54 - -
Apr7g1295 671 SMART AAA_5 109 302 IPR003593 -
Apr7g1295 671 Pfam ABC transporter 100 252 IPR003439 GO:0005524
Apr7g1295 671 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524
Apr7g1295 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 37 668 - -
Apr7g1295 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 319 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1295 Apr-Chr7 20013009 20017351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1295 99 300 Calmodulin-binding Proteins AT2G36910 31.100 9.53e-13 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1295 7 20013009 20017351 Apr7g1295 7 20013009 20017351 ECH