Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1290 ATGAGAACCTTAATGGCTTTTAGTCAAGTTGTCATTGTTCTATTCATCATCTCGCTGAGAGCAAGTTGTTATGGACAAGCAGAACTTGATGTAGCTCCAATGGAGAAAGTAGAGAGGAATGCTCTATACTCCACCATTCAAGGCTTCGTAGGTGATTGGTGGAATGGCTCTGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTCAGGGGGTCTCTTGTGATCTGTTTAATGGATCTTGGTATGTAACTGTCTTGAACATTGGACCCATCCACGACAATTCTTTAAGTTGTGCCAAAATTTTGGAATTTAGACCACGGTTGTTTGAGCTCAAGCACCTTAAAGCTCTATCATTCTTCAAATGCTTTCAATCACAGCACAGGCATCAGGTTACCATTCCCACTGCAAACTGGGAGAAGCTGGCTGGTAGCTTAGAGTCACTTGAGTTTAGATCAAACACAGGTCTCATTGGAAAAATTCCTTCAAGTTTTGGTGTGCTCAAGAACCTTCAGTCACTAGTACTTTTAGAAAATGGTTTAACAGGTGAAATTCCACCAGATATTGGCAACCTCAACAAGTTGAAGAGGCTTGTTCTATCTGGAAACTATATTACTGGACACATACCAGATATTTTTAGTGCACTAGGTCAGTTACTAATACTAGATTTAAGTAGAAATTCACTGTCTGGAAACTTGCCTTTGACACTTGGAAGCTTAACTTCACTTTTGAAGCTTGACGTGAGCCATAATCATTTGGAGGGGAATCTGCTGAAGGAATTTGCTTATCTTAAAAATCTGACCCTCATGGACCTTATGAATAACAGATTCTCTGGAGGGTTGACTTTGAGTATTCAAGAGATGTATTCTTTAGAAGAAATGGTTTTGTCCAACAATGCAATAGGTGGAAATATCAGGACCTTAAAGTGGGAAAATCTTCAGAACTTGGTCATTTTGGATCTCTCTAACATGGGTTTGACAGGAGAAATTCCTGAGTCTATATCAGAATTGAAGAGGTTGAGATTTTTAGGCCTTAGTGACAATAACCTCACAGGCCACCTTTCACCAAAACTATCAACCCTTCCTTGCCTCAATGCACTCTATGTTAACGGCAATAATCTTGTAGGAGAGCTTAAATTCTCTATGGAGTTTTATGGAAAAATGGGAACACGTTTTGGGGCCTGGAACAATCCCAGCCTTTGCTACCTAGTTGGAGTAATGTCAACAAGTCATGTTCCATATGGAGTAAAACCATGCCAGCAAGAGATCAAATTTGTAGAATCCAATACAAAAAATGTGGATATGAACAAGACTATGCACTCCATAGCCTCTTTGGGATTTTTGATTCATGCTCCTAATGGATTCTGGTGGACTTTGTTGCAAGAAATATTGATGATGTGTTTCTTATTTAATTCTCATATAGGTCTTTAA 1428 0.3929 MRTLMAFSQVVIVLFIISLRASCYGQAELDVAPMEKVERNALYSTIQGFVGDWWNGSDLYPDPCGWTPIQGVSCDLFNGSWYVTVLNIGPIHDNSLSCAKILEFRPRLFELKHLKALSFFKCFQSQHRHQVTIPTANWEKLAGSLESLEFRSNTGLIGKIPSSFGVLKNLQSLVLLENGLTGEIPPDIGNLNKLKRLVLSGNYITGHIPDIFSALGQLLILDLSRNSLSGNLPLTLGSLTSLLKLDVSHNHLEGNLLKEFAYLKNLTLMDLMNNRFSGGLTLSIQEMYSLEEMVLSNNAIGGNIRTLKWENLQNLVILDLSNMGLTGEIPESISELKRLRFLGLSDNNLTGHLSPKLSTLPCLNALYVNGNNLVGELKFSMEFYGKMGTRFGAWNNPSLCYLVGVMSTSHVPYGVKPCQQEIKFVESNTKNVDMNKTMHSIASLGFLIHAPNGFWWTLLQEILMMCFLFNSHIGL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1290 475 PRINTS Leucine-rich repeat signature 218 231 - -
Apr7g1290 475 PRINTS Leucine-rich repeat signature 239 252 - -
Apr7g1290 475 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Apr7g1290 475 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 6 470 - -
Apr7g1290 475 SUPERFAMILY L domain-like 41 377 - -
Apr7g1290 475 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Apr7g1290 475 Gene3D Ribonuclease Inhibitor 209 306 IPR032675 -
Apr7g1290 475 Gene3D Ribonuclease Inhibitor 36 208 IPR032675 -
Apr7g1290 475 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1290 Apr-Chr7 19951271 19953887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1290 144 418 Receptor kinase-like Gene Family AT4G08850 32.727 6.36e-26 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1290 7 19951271 19953887 Apr7g1290 7 19951271 19953887 ECH