Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1289 ATGGCGTCTGAGAGCGCTTCTCGATCGAGTTCCGCGGCAGATTCCTACATTGGGAGCTTGATAAGCTTGACCTCAAAGAGTGAGATCAGATACGAAGGCATTCTCTACAACATCAATACCGAAGAGTCCAGTATTGGCCTCAGAAATGTGCGATCTTTTGGAACAGAAGGAAGGAAAAAGGATGGTCCACAAATTCCTCCAGGTGACAAGGTGTATGAGTATATACTTTTCCGCGGGACTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCTGTCCAGCCTACTCCACAAGTCAACAATGACCCAGCCATTATTCAGTCTCACTATCCTGGCCCAGACCCCACATCTACAGGTTTGCCTTCTGCTGTAAGTGGGTCTCTGACTGATCTTACTACTCATACCACACAGCTTGGACTTCCAGGGTCTAATTTTCAAGGGCCTTTGCCTTTGTATCAACCTGGAGCAAACATAGGATCGTGGGGAACTTCTCCACCTGCTCCAAATGTAAATGGTGGTGGGCTTGCCATGCCAATGTATTGGCAAGGATATTATGGTGCCCCAAATGGGCTTCCTCATTTACACCAACAATCTTTGCTTCGACCACCACCTGGTTTATCAATGCCTTCATCTATGCAGCAGCAAATGCAGTATCCCAATTTCAGTCCCTCTTTACCAACTGTATCTTCTAATTTGCCAGAATTACCATCAGCTTTGCTACCTGGTAGTACCAATACCCCTAGTGTAACATCTACTTCCTTGCCTCCATTAAATTTGCCTCCAGCACCTTCTGCTTTGCCTCCTGTGCCTTCTGCTATATCTCATGCACCTTCTACTTTATCCCCTGCACCTTCTGCTACAGTAGCCTCAGAAATTTTGCCAGTATCAGTAACAAACAAGGCACCCAATGTTTCAACTTCAGCAGTGACACTAGCTGCCAACTTGCCATCACTAACTTCACTGACCAACTCTGGTCCAGATATAAATGCTACAGTGCCACTGGTCTCCAGCAAATCGAATGCAATTTCAGGTTCAAGCTTACCCTATCAAACTGTATCCCAGTTGTCTCCTGCAGCTGTTGGATCATCGAGTACTATCCTTACAGAAACGTCAACCCCTTCTCTGGTAACCCCAGGACAGTTATTGCAGCCTGGACCAACTATAGTTTCTTCTGCTCAGCCTTTGCAAATTCCTCATAAGGATGTTGAAGTGGTTCAAGTATCATCAACATCATCTACTAAGCCATCTCTGCCAGTTTCTGCTGAAACTCAACCACCAATACTGCCATTGCCAGTAACATCACGACCCACTCTCAGGCCCGGTGGAGCTTCTACCCCAACACGTCATGGCTATAATTTCAGAGGACGAGGAAGAGGAAGAGGAACTGGGGGCTTGCGCCCGGTGACAAAATTCACTGAAGATTTTGATTTCATGGCAATGAATGAGAAGTTCAAAAAGGATGAAGTATGGGGTCATCTTGGTAAAAGCAGTAAGTCTCATTCAAAAGATAAAGATGGGGAAGAAAATGCTTTTGATGAAGATTATCAAGATGAGGACAATGATGATTTATCAAATTTTGATGTTAAGCCCATTTATAACAAGGATGACTTCTTTGATTCACTCTCTTCCAATGTGCATGATAGTGCTTCACAGAATGGAAGGACTAGATACTCTGAACAAATCAAGATTGATACTGAGACATTTGGGGATTTTATGAGGCATCGTGGGGGTCGGGGTGGCCGGGGCCCTGGCCGTGGTGGGCGTACACGCGGTGGTTATTATTATGGAAGGGGAGGGTATGGCTACTCTGGAAGAGGAAGGGGACGCGGCATGCTTAGCCGCAGTTCTTGGGCGGAGAACATGAGTTAA 1869 0.458 MASESASRSSSAADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGPQIPPGDKVYEYILFRGTDIKDLQVKSSPPVQPTPQVNNDPAIIQSHYPGPDPTSTGLPSAVSGSLTDLTTHTTQLGLPGSNFQGPLPLYQPGANIGSWGTSPPAPNVNGGGLAMPMYWQGYYGAPNGLPHLHQQSLLRPPPGLSMPSSMQQQMQYPNFSPSLPTVSSNLPELPSALLPGSTNTPSVTSTSLPPLNLPPAPSALPPVPSAISHAPSTLSPAPSATVASEILPVSVTNKAPNVSTSAVTLAANLPSLTSLTNSGPDINATVPLVSSKSNAISGSSLPYQTVSQLSPAAVGSSSTILTETSTPSLVTPGQLLQPGPTIVSSAQPLQIPHKDVEVVQVSSTSSTKPSLPVSAETQPPILPLPVTSRPTLRPGGASTPTRHGYNFRGRGRGRGTGGLRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKSSKSHSKDKDGEENAFDEDYQDEDNDDLSNFDVKPIYNKDDFFDSLSSNVHDSASQNGRTRYSEQIKIDTETFGDFMRHRGGRGGRGPGRGGRTRGGYYYGRGGYGYSGRGRGRGMLSRSSWAENMS* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1289 622 MobiDBLite consensus disorder prediction 411 467 - -
Apr7g1289 622 CDD LSm14_N 16 87 IPR025609 -
Apr7g1289 622 MobiDBLite consensus disorder prediction 492 509 - -
Apr7g1289 622 SMART FDF_2 469 572 IPR019050 -
Apr7g1289 622 MobiDBLite consensus disorder prediction 225 253 - -
Apr7g1289 622 ProSiteProfiles FFD box profile. 530 545 IPR025761 -
Apr7g1289 622 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Apr7g1289 622 MobiDBLite consensus disorder prediction 225 255 - -
Apr7g1289 622 Gene3D - 6 92 - -
Apr7g1289 622 PANTHER SCD6 PROTEIN-RELATED 264 611 - -
Apr7g1289 622 PANTHER SCD6 PROTEIN-RELATED 1 257 - -
Apr7g1289 622 MobiDBLite consensus disorder prediction 570 594 - -
Apr7g1289 622 PANTHER LSM DOMAIN, FDF DOMAIN, FFD BOX, DFDF DOMAIN, TFG BOX-RELATED 1 257 - -
Apr7g1289 622 PANTHER LSM DOMAIN, FDF DOMAIN, FFD BOX, DFDF DOMAIN, TFG BOX-RELATED 264 611 - -
Apr7g1289 622 Pfam FDF domain 470 569 IPR019050 -
Apr7g1289 622 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Apr7g1289 622 ProSiteProfiles TFG box profile. 552 572 IPR025768 -
Apr7g1289 622 ProSiteProfiles DFDF domain profile. 463 499 IPR025762 -
Apr7g1289 622 MobiDBLite consensus disorder prediction 492 526 - -
Apr7g1289 622 SMART LSM14_2 10 110 IPR025609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1289 Apr-Chr7 19942501 19948059 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1289 7 19942501 19948059 Apr7g1289 7 19942501 19948059 ECH