Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1282 ATGCCTTCACACCGCTCTTTCATTTCCCTTTTCACTCTCTTCATCTTAATCCCCATACACTTCTCCACCTCCACCCATTACCTAAGGTTACCGTTACTACCGAGGAGCCCACCTTCATCGCCGGCGCAACTTCTCGCCGCTGACATCCACCGTCTCTCCGCTCACCGGACTTCTCTAAAATCCCCTCTCACCTCCGGCGCCGCCACCGGGTCCGGCCAGTACTTCGCCGACCTCCGAATCGGAACTCCGCCGCAGCGCCTCCTCCTCGTCGCCGACACCGGCAGCGACCTCGTATGGGTGAAATGCTCCGCTTGCAAAAACTGCTCTAACCACCGACCCGGATCCGCATTCCTGCCCCGACATTCTAGAACCTTCTCATCACACCACTGCTACGACTCATCGTGTCGACTCGTTCCCCGTCCGAGTCATACCCCACCCTGCAACCATACCCCAATCCACACACCGTGTCGCTACGAGTATTCCTATGCGGACGGGTCCATCACAAGCGGGTTCTTCTCCAAAGAAACGACGACGTTCAACACTAGCTATGGTAGGGAAACGAAAATTAAAAGCCTCGCCTTTGGGTGCGGGTTTCGGATCTCGGGTCCTAGCGTTTCCGGGTCGAGCTTCAACGGGGCACAAGGCGTAATGGGCTTGGGCCGCGGACCCATATCATTTACTTCTCAATTGGGTCGTAAATTCGGGAATCGATTCTCTTACTGTCTACTCGACTACACCATATCCCCACCCCCGAAAAGCTACCTAACCATCGGCGCTTACTCAAACGACGTCGTTTCCGGCAAGTTCAGCTACACGCCGTTGTTAACTAACTCCTTTTCTCCCACGTTTTATTACATTGGAATCGAGAGTGTGTCCGTTGACGGCGTTAAGTTACCCATAAGCTCTTCCGTTTGGGATATTGACGATAACGGTAACGGCGGCACCGTCGTGGATTCCGGCACCACGCTGACCTTTCTGCCGGAGCCGGCTTACAGGCAGGTCCTTGCGGCGTTCCGGCGGCGCATGAGGCTTCCGCCGGCAGAGGGCCCTGCGCTTGGGTTTGATCTTTGTGTGAACGTTTCCGGCGTGGCTAAGCCGAGGCTGCCGAAGCTGAGATTCAATCTCGCCGGAAAAGTGGTGTTATCGCCGCCGCCGAGGAATTATTTCATTGAGGTGGTGGAGTGGGTTATGTGTCTGGCGGTTCAACCGGTTAAACCGGGTTCGGGGTTTTCAGTTATAGGTAATCTAATGCAACAAGGGTACTTGTTTGAATTCGATATGGACCGGTTGCGCTTAGGGTTCTCGCGTCATGGGTGTGCGGTTCGCTAA 1329 0.5508 MPSHRSFISLFTLFILIPIHFSTSTHYLRLPLLPRSPPSSPAQLLAADIHRLSAHRTSLKSPLTSGAATGSGQYFADLRIGTPPQRLLLVADTGSDLVWVKCSACKNCSNHRPGSAFLPRHSRTFSSHHCYDSSCRLVPRPSHTPPCNHTPIHTPCRYEYSYADGSITSGFFSKETTTFNTSYGRETKIKSLAFGCGFRISGPSVSGSSFNGAQGVMGLGRGPISFTSQLGRKFGNRFSYCLLDYTISPPPKSYLTIGAYSNDVVSGKFSYTPLLTNSFSPTFYYIGIESVSVDGVKLPISSSVWDIDDNGNGGTVVDSGTTLTFLPEPAYRQVLAAFRRRMRLPPAEGPALGFDLCVNVSGVAKPRLPKLRFNLAGKVVLSPPPRNYFIEVVEWVMCLAVQPVKPGSGFSVIGNLMQQGYLFEFDMDRLRLGFSRHGCAVR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1282 442 SUPERFAMILY Acid proteases 68 439 IPR021109 -
Apr7g1282 442 CDD pepsin_A_like_plant 73 439 IPR034161 -
Apr7g1282 442 Gene3D Acid Proteases 48 258 IPR021109 -
Apr7g1282 442 PANTHER OS07G0603500 PROTEIN-RELATED 8 441 - -
Apr7g1282 442 Pfam Xylanase inhibitor N-terminal 74 258 IPR032861 -
Apr7g1282 442 Gene3D Acid Proteases 259 441 IPR021109 -
Apr7g1282 442 ProSiteProfiles Peptidase family A1 domain profile. 74 435 IPR033121 -
Apr7g1282 442 PANTHER BNAA02G27600D PROTEIN 8 441 - -
Apr7g1282 442 Pfam Xylanase inhibitor C-terminal 284 435 IPR032799 -
Apr7g1282 442 PRINTS Pepsin (A1) aspartic protease family signature 80 100 IPR001461 GO:0004190|GO:0006508
Apr7g1282 442 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Apr7g1282 442 PRINTS Pepsin (A1) aspartic protease family signature 411 426 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1282 Apr-Chr7 19908484 19909952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1282 72 439 Miscellaneous Gene Families AT1G77480 26.943 5.40e-24 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1282 7 19908484 19909952 Apr7g1282 7 19908484 19909952 ECH