Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1275 ATGCCACCGACACTCACATTCACACTTACACACACTATCTCGTTAGTCTTGTTATTCTTCTTCGCCCACGCGGCGCATTCTCCGGCAACCGTAATCTCCGGTGAGCTTCCAACGTTCCGGGAAGCGCCGGCATTCCGCAATGGAAGGGAATGCCAAAAGCGAGTTCATGGCGGCTCCGTCATCCACATCGCGATGACGCTGGACGCGACCTACCTACGAGGCTCCGTCGCCGGCGTGTTCTCCGTTCTGCAGCACGCGTCGTGTCCGGAGAACGTCGTGTTCCACTTCATCGCCACCACGCACCGCCGGCCAGAGCTCCGGCGCATCATTACCACTACGTTCCCGTACTTAACCTTCCACCTCTACCACTTCGATGCCAATCTCGTACGAGGCAAGATCTCGTACTCTATCCGTCGCGCGCTGGACCAGCCTCTGAATTACGCGAGGATGTACCTCGCCGACATACTTCCGGCGAACGTTCGGCGAATAATCTACTTTGATTCCGATCTGATCGTCGTGGATGACGTGGCGAAGCTGTGGAGCATCGATCTCCACGCGCGCGTCCTCGGCGCGCCCGAGTACTGCCACGCTAACTTCACCAATTACTTCACGCACCGGTTCTGGTCGAGCCCTAGCTATGCGGCGTCGTTTAAGGGACGCGAAGCGTGCTACTTTAACACCGGCGTGATGGTGATCGATTTGTGGAAATGGCGCGAGGGACGGTACACGGAGAAGCTCGAAAACTGGATGCGGATCCAGAAACGGAACCGGATCTACGAACTCGGATCGTTGCCGCCGTTTCTGCTCGTCTTCGCCGGTGAAGTTGAGCGCGTGGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGATAATCTGGAAGGGCTTTGCCGTGACCTGCACCCTGGTCCCGTGAGTCTCCTCCACTGGAGCGGAAAGGGGAAACCGTGGCTGAGAATTGACTCGAAGAAGCCATGTCCATTGGATAGCTTGTGGGCTCCTTACGATCTCTTTCGCCATTCTTCGTCGTTGTTCTCCGATTCGTAG 1044 0.5757 MPPTLTFTLTHTISLVLLFFFAHAAHSPATVISGELPTFREAPAFRNGRECQKRVHGGSVIHIAMTLDATYLRGSVAGVFSVLQHASCPENVVFHFIATTHRRPELRRIITTTFPYLTFHLYHFDANLVRGKISYSIRRALDQPLNYARMYLADILPANVRRIIYFDSDLIVVDDVAKLWSIDLHARVLGAPEYCHANFTNYFTHRFWSSPSYAASFKGREACYFNTGVMVIDLWKWREGRYTEKLENWMRIQKRNRIYELGSLPPFLLVFAGEVERVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHSSSLFSDS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1275 347 Pfam Glycosyl transferase family 8 62 319 IPR002495 GO:0016757
Apr7g1275 347 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED 12 346 - -
Apr7g1275 347 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 12 346 - -
Apr7g1275 347 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 62 328 IPR029044 -
Apr7g1275 347 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 339 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1275 Apr-Chr7 19831375 19833010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1275 27 347 Glycosyltransferase AT1G13250 78.354 0.0 507
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1275 7 19831375 19833010 Apr7g1275 7 19831375 19833010 ECH