Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1273 ATGGATGCAATTAGTTGCATGGATGAAAGCACCACTACTGAATCACTCTCTATAAGTCTTTCACCCACCACCGCCACGTCATCGGACAAAAAAACTTCTCCGCCGCCGCCCAACACGCTCTGCCGCGTCGGCAGCGGCGCAAGTGCTATCGTCGATCCCGATAGCGGTGGCGGAGGAGGAGCCGAAGCGGAATCGCGGAAGCTTCCGTCGTCCAAGTACAAAGGCGTGGTGCCGCAACCCAACGGCCGGTGGGGCGCGCAGATTTATGAGAAGCACCAGCGCGTGTGGCTCGGAACCTTCAACGAAGAAGACGAGGCCGCGAGAGCCTACGACATCGCCGCGCAACGGTTCCGCGGCAAGGACGCCGTCACGAACTTCAAGCCACTTACCGGCGCCGCCGCTGACGACGGCGAAGACGACGGAGAAGCCGAGTTTCTCAACTCGCATTCCAAGTCCGAGATCGTCGACATGCTGCGGAAGCACACTTACAATGACGAGCTCGAGCAGAGCAAGCGCAGCCGCGGCGTTGTCGGCAGGCGTCGAGGTGGAGGCGGCGCCGCCGGAAACGGAAACTCGATGTCGGGGGCTTGCGCGACGAAGGCGCGTGAGCAACTTTTCGAGAAAGCGGTTACGCCGAGCGACGTTGGGAAGTTGAATCGGTTAGTTATACCGAAACAGCACGCGGAGAAACACTTTCCGTTGCAGAGCGTTAACGGCGTTAGCGCGTCGGCGGCGAAGGGTGTGTTGTTGAACTTCGAAGACGTTGGAGGGAAAGTGTGGCGGTTCCGTTACTCATATTGGAACAGTAGCCAGAGCTATGTGTTGACCAAAGGTTGGAGCCGCTTCGTTAAGGAAAAGAACCTCAAAGCCGGTGACACGGTTTGTTTTCACCGGTCCACTGGACCGGACAAGCAGCTTTATATTGATTGGAAGTCAAGAAACGTTAACGATATCGGTTTGTTCGGACCGGTTGGACCGGTTGTCGAACCGGTTCAGATGGTTCGGCTCTTTGGAGTTAACATTTTGAAACTTCCCGGGTCTGATGCTAATGCTAGTAACAATAATGCTACCGCTATTACTGGGTGTTGCAATGGCAAGAGAAGAGAAATGGAACTATTTTCTTTAGAGTGTAGCAAGAAGCCTAAGATTATTGGTGCTTTGTAA 1164 0.549 MDAISCMDESTTTESLSISLSPTTATSSDKKTSPPPPNTLCRVGSGASAIVDPDSGGGGGAEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGKDAVTNFKPLTGAAADDGEDDGEAEFLNSHSKSEIVDMLRKHTYNDELEQSKRSRGVVGRRRGGGGAAGNGNSMSGACATKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSVNGVSASAAKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFHRSTGPDKQLYIDWKSRNVNDIGLFGPVGPVVEPVQMVRLFGVNILKLPGSDANASNNNATAITGCCNGKRREMELFSLECSKKPKIIGAL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1273 387 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 23 387 - -
Apr7g1273 387 MobiDBLite consensus disorder prediction 1 79 - -
Apr7g1273 387 ProSiteProfiles B3 DNA-binding domain profile. 206 314 IPR003340 GO:0003677
Apr7g1273 387 ProSiteProfiles AP2/ERF domain profile. 72 127 IPR001471 GO:0003700|GO:0006355
Apr7g1273 387 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 23 387 IPR044800 GO:0003700
Apr7g1273 387 CDD B3_DNA 205 299 IPR003340 GO:0003677
Apr7g1273 387 Gene3D - 194 323 IPR015300 -
Apr7g1273 387 SMART rav1_2 72 133 IPR001471 GO:0003700|GO:0006355
Apr7g1273 387 SMART B3_2 206 314 IPR003340 GO:0003677
Apr7g1273 387 SUPERFAMILY DNA-binding domain 71 127 IPR016177 GO:0003677
Apr7g1273 387 Pfam B3 DNA binding domain 206 313 IPR003340 GO:0003677
Apr7g1273 387 CDD AP2 71 126 IPR001471 GO:0003700|GO:0006355
Apr7g1273 387 MobiDBLite consensus disorder prediction 167 194 - -
Apr7g1273 387 Pfam AP2 domain 71 119 IPR001471 GO:0003700|GO:0006355
Apr7g1273 387 Gene3D AP2/ERF domain 71 128 IPR036955 GO:0003700|GO:0006355
Apr7g1273 387 MobiDBLite consensus disorder prediction 1 39 - -
Apr7g1273 387 SUPERFAMILY DNA-binding pseudobarrel domain 204 311 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1273 Apr-Chr7 19789486 19792721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1273 5 387 B3 DNA Binding Superfamily AT1G25560 60.969 1.67e-148 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-RAV Apr7g1273 B3 1.3e-28 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1273 7 19789486 19792721 Apr7g1273 7 19789486 19792721 ECH