Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1269 ATGCAATTTGCTGAGAAAATGCAACCCCAGAAAATGGGGTTTCGTGAGTACATCGAAGCATTGGAGGAAGAAAGGAGAAAGATTCAAGTTTTCCCTAAAGAGCTTCCTCTTTCATTGGAGCTTGTCACGCAAGCCATTGAAACATGTAAGCAGCAATTGTCTGGAACGGTTGCTGAGTACAATTTAAATGGCCAATCGGAGTGTTCGGAGCAGACATCAATGGATGAAGGACCTGTTTTTGAGGAGTTCATTCCTATAAAGAAAAGGGAATCCCCAGATTCTGTTGAAGAAGATGATGATGAAGAAGAAGATAATGATGATGATGATGAAGAGCAACATTCTCATAAGCACAAGAACACGAACACCCAGAAATCAGATTGGCTCAGATCTGTTCAGTTGTGGAATCCCAGTCCCCCTCCTTCCAAAGAGGATGTGCCAAGAAAAACAAATGTTGTGGAAGTGAAGAGAAACGGTGGTGCTTTTCAGCCATTTCAGAGAGAGGAAAGTGGTGTTGGAAAGGGAAATGCATCAGCAAATGGTAAAGCACCCTCTTCACCACCAGTGGCTGCTACAAGTTCTACAGGGCCAGTGAGAGTAGAGAATGGTGGTGGAAGCAGCAAAGGAGAAGAGAAAGGACAGGCTCAGAGAAAGCAGCGCAGGTGTTGGTCTCAGGAATTGCACAAACGCTTCTTGCATGCACTTCAGATGCTTGGGGGTGCAGATTCTGCCACGCCCAAACAGATCAGGGAGTTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTCTGCACACTAGAAGAAGCCCCATAATTCAGAACAATGGTAATTCACAAACAACCCCTTTATTCCTTGTGGGGAACATTTTTGTGCAACCACAAGAATATGGTGCGGTAGCTACTTCAACAGCATCTGGAGGAGGGGAATTGACCACAGTTACACCTCCAACTGGAATTTATGCGCCTGTGGCTTCACACCCTCCACCTGTCACCCACACACCAATCAAATTTAAGCAATTAGAGGTGTCTCACTCTCAGCATTCACATTCTGAAGAAGAAAGGGCTAATCACAGTGAAGGGGATGTTCATTCAAATTCCCATGCTTCCTCATCCTCCACCCCAACTTCACCTGCCTCTTGA 1161 0.4505 MQFAEKMQPQKMGFREYIEALEEERRKIQVFPKELPLSLELVTQAIETCKQQLSGTVAEYNLNGQSECSEQTSMDEGPVFEEFIPIKKRESPDSVEEDDDEEEDNDDDDEEQHSHKHKNTNTQKSDWLRSVQLWNPSPPPSKEDVPRKTNVVEVKRNGGAFQPFQREESGVGKGNASANGKAPSSPPVAATSSTGPVRVENGGGSSKGEEKGQAQRKQRRCWSQELHKRFLHALQMLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPIIQNNGNSQTTPLFLVGNIFVQPQEYGAVATSTASGGGELTTVTPPTGIYAPVASHPPPVTHTPIKFKQLEVSHSQHSHSEEERANHSEGDVHSNSHASSSSTPTSPAS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1269 386 MobiDBLite consensus disorder prediction 95 109 - -
Apr7g1269 386 MobiDBLite consensus disorder prediction 178 200 - -
Apr7g1269 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 274 IPR017930 -
Apr7g1269 386 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 217 272 IPR006447 GO:0003677
Apr7g1269 386 Gene3D - 216 274 - -
Apr7g1269 386 SUPERFAMILY Homeodomain-like 215 275 IPR009057 -
Apr7g1269 386 MobiDBLite consensus disorder prediction 349 368 - -
Apr7g1269 386 MobiDBLite consensus disorder prediction 82 219 - -
Apr7g1269 386 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 383 - -
Apr7g1269 386 MobiDBLite consensus disorder prediction 369 386 - -
Apr7g1269 386 MobiDBLite consensus disorder prediction 347 386 - -
Apr7g1269 386 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 383 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1269 Apr-Chr7 19749849 19752173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1269 1 331 G2-like Transcription Factor Family AT1G68670 48.991 4.83e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr7g1269 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1269 7 19749849 19752173 Apr7g1269 7 19749849 19752173 ECH