Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1262 ATGGGACCTCTAACTTATCTCTTTCCGCTCTTCTTTCTGTTCTGTTCTTCCCCCTTAACACACTCTCGAACCACACCTCAAACCCCCAAAACGACACCCCTCCACGTCGTTTCCTCCATTCAAAACACACACAAAGCCCTTGCCTTAACCCCCCCCCACCACCACCGCTCACAACGACAACAAGAACCATCTTTTGCATCATCGTTCATCCTTCAAGTGCATTCTCGAGCCTCAATTCAGAAACCTTCCCACAACGACTACAAGTCTCTAACCCTATCGCGACTTGAGCGCGACTCAGCCCGAGTCAGAGCCTTACAGACTCGCCTGGATCTCGCCTTAAAGCGCATCTCCAACTCGAATCTTCACCCCACCGAGTCCGGCAACGAGTTCAAATTCAACGAACTGCAAGGCCCAATCATCTCGGGAACGAGTCAAGGAAGCGGCGAGTACTTCCTCCGAGTCGGAATTGGAAAACCGCCGAGTCAAGCCTACATGGTACTCGACACAGGGAGTGACGTAAGTTGGATCCAATGCGCACCATGCTCCGATTGCTACCAACAATCCGATCCGATTTTCGACCCCCTTTCATCCTCTTCCTACGAGCTGATCCACTGCGACGCGCCACAGTGTAAATCCTTGGACCTCTCTGAATGCCGCAACGAAACGTGTCTCTACGAGGTTTCCTACGGTGACGGTTCTTACACAGTTGGTGAGTTCGCTACTGAAATGGTGACTCTCGGCACGGCTTCAGTTGACGGCATTGCCATCGGCTGTGGTCATAATAACGAAGGCTTGTTCGTCGGCGCTGCCGGCTTGCTCGGCCTCGGCGGCGGCTCACTTTCTTTTCCGGCTCAGCTCAATGCAACGTCGTTTTCTTACTGCCTCGTGGACCGTGACACCGATTCTGCCTCGACTCTCGAGTTTGACTCGCCATTTCCACGTAACGCCGTCACCGCGCCGTTACGAAGAAACCCCGAGCTAGACACGTTTTACTATCTCGGCTTGACGGGAATCAGCGTCGGTGGTGACTTGCTTCCGATTCCTGAAGCGAGTTTCGAGGTCGACGCCACCGGCGGCGGCGGGATTATCGTAGATTCTGGCACGGCGGTGACGCGGTTGCGAAGCGAGGTGTACGACGCGCTTCGGGACGCGTTTGTGAGGGGGACGAAGGGGTTGCCCTCTGCGAACGGTGTGTCGTTGTTTGACACGTGCTACGACTTGTCGTCAAAGTCCAGCGTGGATGTTCCGACGGTGTCGTTTCACTTTCCCGACGGGAAGGAGTTACCGTTACCGGCGAAGAATTACCTAATACCGGTTGACTCAACGGGGACGTTTTGTCTGGCGTTTGCGCCCACGACGTCGTCGTTGTCAATCATTGGGAACGTGCAGCAGCAGGGGACACGTGTCGGTTTCGACATCAGTAACTCGCTCGTTGGATTCTCTGCAAATAGTTGCTAG 1458 0.5453 MGPLTYLFPLFFLFCSSPLTHSRTTPQTPKTTPLHVVSSIQNTHKALALTPPHHHRSQRQQEPSFASSFILQVHSRASIQKPSHNDYKSLTLSRLERDSARVRALQTRLDLALKRISNSNLHPTESGNEFKFNELQGPIISGTSQGSGEYFLRVGIGKPPSQAYMVLDTGSDVSWIQCAPCSDCYQQSDPIFDPLSSSSYELIHCDAPQCKSLDLSECRNETCLYEVSYGDGSYTVGEFATEMVTLGTASVDGIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPAQLNATSFSYCLVDRDTDSASTLEFDSPFPRNAVTAPLRRNPELDTFYYLGLTGISVGGDLLPIPEASFEVDATGGGGIIVDSGTAVTRLRSEVYDALRDAFVRGTKGLPSANGVSLFDTCYDLSSKSSVDVPTVSFHFPDGKELPLPAKNYLIPVDSTGTFCLAFAPTTSSLSIIGNVQQQGTRVGFDISNSLVGFSANSC* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1262 485 ProSiteProfiles Peptidase family A1 domain profile. 150 481 IPR033121 -
Apr7g1262 485 CDD cnd41_like 149 485 IPR033873 -
Apr7g1262 485 SUPERFAMILY Acid proteases 144 485 IPR021109 -
Apr7g1262 485 Pfam Xylanase inhibitor C-terminal 331 481 IPR032799 -
Apr7g1262 485 PANTHER ASPARTYL PROTEASES 10 485 IPR001461 GO:0004190|GO:0006508
Apr7g1262 485 Pfam Xylanase inhibitor N-terminal 150 308 IPR032861 -
Apr7g1262 485 Gene3D Acid Proteases 125 308 IPR021109 -
Apr7g1262 485 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 165 176 IPR001969 GO:0004190|GO:0006508
Apr7g1262 485 Gene3D Acid Proteases 310 485 IPR021109 -
Apr7g1262 485 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1262 Apr-Chr7 19683795 19685252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1262 140 485 Miscellaneous Gene Families AT1G77480 26.302 1.14e-22 98.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1262 7 19683795 19685252 Apr7g1262 7 19683795 19685252 ECH