Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1255 ATGACCACCGACGACAGCCACAATTCCCTTCGCAAGCACCGCCGCTCCTCCTCTCCGGAGGACGCTGACAGATCCTCGAAGCGCCACCACCGCCTCAGGAGCACAAAGCGCAATGTAGAAAGCGAATGCGATTGCGAAACTGCTGCGGAGGCTCCTTCTCCGACTCTGTCCCGTAATTCTGGTCCGAGTTGTCACGTGCCCGATGACGACGATGTGGAAGAGGGAGAGATTCTCGAAGAAGATGATGGTGTTACTCAGAAACAGCTTGGCGAAAGCGACGTAGCCGTAGATCGGGATGTTCGATCTGGTAAAGCAAATCTGGGACTTTTTGTCCAAGAGACTTTGTTGCATGCTGATGATTTAAAAACTAGAAGGGAGTGCATTAGCGATTATAAATTTACTAGTCCTGATGGAGAAGACGGGACATACTGTCATAGTAACATTAACCATGAAATACATGAAGATGAAGGTTTTCCTAAGTATTCAAGTGGTGATCGTCGAGATGGAAAGGATGCTATAGCTAGTACAGATGGTATGGACATTGGGCTTTTGGATCATAAATCTTCTAAAGGAGATAAGAGGCATAATGGAGAACATGGATGTTTTAATGGAAACAAGAAACTAAAAGGTAACTGTGATGATGAAGATGTGGACGTTGATAAAGGGAAAATAGATTACTGTAGAAACTCTTTCTCTGAGAGTGGAGGAGAGAGATATAGAATGGCAAGATGTTCACCTTCTCGTGATAGATATAGAAGTCAATCAAGATCATATGGTCATATTAGTAACAGGTCTCATTCTTGTAGTATAGTAAAAGAATATGCTCATTCCAAGAGAAGGCACTCTGGTGAACAAGGGGACCTTTCATATGTGAGTATACTAAAAACTGACTATGACCTTGATGATGAAAGAGTGATTGCAAACATATGGGAGTGTGGTCATGTCAGTAGAGATTTGGTAGTGGATGAAGGAAGGGAACATAGAGCAAGTTACCACATGCGGGAGGGCTTGGATAAGGATAGGAGTAGGGGCCAAGATGTTGATAGGGACATTAAGATGGAAAGAAAGCAAGAGAGGAGCAGGAATAGGGAGGTCAATTGGGTGTGTAGAAAGGAAAAGGAACATGAAAGGAGCCATGAAAGGCATAGAAGGGATGTAGAAAAAGATAGGAGCAGGGAAAGGGAATGTTATAGGGATAGGAGAAGAGAAAAGGAAAGAGACAGGAGCAGGGAGATGGTGTTTGAGAGGGATAGGAGAAGGGATAAGGAAACATATCGAAGCAGCAACAGAACAAGGGGTGGTGAGGGAGATACAGACTGGGAAAGTGAACAGGATGATAAGAATCAGGAAAGGAATAAAATCAAGGACAGGGAGATGGAGAGGGGAGATGATAGAAATAGGTACAAGGATAGAGGCACTCTGGATGATAAGTATCCCTGTCAAGAGGATGGTTATGATAGTCATGATAGGTATAAAAGGCATTCAAAACAGAAAGAAACTGAATGCCAGCAAGAAAGAAAAATAAATTCTGGGCCTATAAAGGTTTATAACTCTTTGGGAAGTACCTCAGTAGATGATGAAAGCAAACTAGAGAGAGTGGAGGATGAACAAGATGACTTGGATGAGAAGATTACATTGCAATTACCTGATCAAGAAGAGGAAGATCTCAATAGGGTTAAAGAGGAGAGTAGAAGGAGAAGGGAAGCAATCTTAGAGAAGTACAAGAAGAAACAGCAACAAGTTGAACAAACTACAGAAAATGAAGGAAAAGACAAACAAGCTGTGGAGATTCCTTCTGCTATTTGTGAAGCTCTTGATGTTACAAGCAATGGTGTTGGTAATGCAGAAACATTTTTCTCTGTCAGGAAATCTCCTCTGGAAAATGAGAGTGTTGCTTTTGATAAGATTTCTGGTGCTAGAGGCCTTGGAGAGGGTAGTCCTAAGAGTGAGAGATCAGGTGACAAGTTTTGTGATGATATATTTGGCGATACACCAACTGGAGTTCAGAAATCAGCCAAAGGAGATGGTTTACAAATTGAGAGGGGTGGCCTACATGACAATTGGGATGATGCAGAAGGTTATTACAGTTACCGTTTTGGTGAAATACTTGATGGCCAATATGAAGTCACCGCTGCTCATGGGAGGGGTGTCTTTTCAACAGTGGTCCGAGCAAGGAATCTTAAAAATGGCAATGGTGAGCCTAAAGAAGTTGCTGTAAAAATTATTCGTAATAATGATACAATGTACAAGGCTGGTATGGATGAGTTAGTCATATTAAAGAAATTAGTAGGTGCTGATCCTGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAACACAGGAATCACCTTTGTTTAGTCTTTGAATCTCTCCATATGAATCTACGTGAGGTTTTAAAGAAGTTTGGTCGCAACATTGGGCTTAGGCTAACTGCAGTGAGAGTGTATGCAAAACAACTTTTTATTGCACTAAAGCATCTCCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCTGATAATATGTTGGTGAATGATGCCAAAAATGTGTTGAAACTTTGTGACTTGGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCCTATCTTGTGAGTCGATTTTATCGTGCCCCTGAAATAATACTTGGCTTGCCCTATGATCATCCATTGGATATATGGTCTGTGGCCTGTTGTTTGTATGAACTCTATACAGGGAAAGTTCTTTTTCCAGGTTCTACAAACAATGATATGCTTCGACTTCACATGGAATTGAAGGGTCCTTTTCCAAAAAAGATGCTTCGTAAGGGAGCATTTATTGTACAGCATTTTGATCAGGACCTGAATTTTCTTGCTACAGAGGAGGATCCTGTGACAAAAAAGGAGACCACCCACTGGTCTGAGGCTTTCCTCCCGTGA 2925 0.4178 MTTDDSHNSLRKHRRSSSPEDADRSSKRHHRLRSTKRNVESECDCETAAEAPSPTLSRNSGPSCHVPDDDDVEEGEILEEDDGVTQKQLGESDVAVDRDVRSGKANLGLFVQETLLHADDLKTRRECISDYKFTSPDGEDGTYCHSNINHEIHEDEGFPKYSSGDRRDGKDAIASTDGMDIGLLDHKSSKGDKRHNGEHGCFNGNKKLKGNCDDEDVDVDKGKIDYCRNSFSESGGERYRMARCSPSRDRYRSQSRSYGHISNRSHSCSIVKEYAHSKRRHSGEQGDLSYVSILKTDYDLDDERVIANIWECGHVSRDLVVDEGREHRASYHMREGLDKDRSRGQDVDRDIKMERKQERSRNREVNWVCRKEKEHERSHERHRRDVEKDRSRERECYRDRRREKERDRSREMVFERDRRRDKETYRSSNRTRGGEGDTDWESEQDDKNQERNKIKDREMERGDDRNRYKDRGTLDDKYPCQEDGYDSHDRYKRHSKQKETECQQERKINSGPIKVYNSLGSTSVDDESKLERVEDEQDDLDEKITLQLPDQEEEDLNRVKEESRRRREAILEKYKKKQQQVEQTTENEGKDKQAVEIPSAICEALDVTSNGVGNAETFFSVRKSPLENESVAFDKISGARGLGEGSPKSERSGDKFCDDIFGDTPTGVQKSAKGDGLQIERGGLHDNWDDAEGYYSYRFGEILDGQYEVTAAHGRGVFSTVVRARNLKNGNGEPKEVAVKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKHRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRVYAKQLFIALKHLRNCGVLHCDIKPDNMLVNDAKNVLKLCDLGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVACCLYELYTGKVLFPGSTNNDMLRLHMELKGPFPKKMLRKGAFIVQHFDQDLNFLATEEDPVTKKETTHWSEAFLP* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1255 974 MobiDBLite consensus disorder prediction 332 357 - -
Apr7g1255 974 MobiDBLite consensus disorder prediction 407 505 - -
Apr7g1255 974 MobiDBLite consensus disorder prediction 407 539 - -
Apr7g1255 974 MobiDBLite consensus disorder prediction 1 92 - -
Apr7g1255 974 MobiDBLite consensus disorder prediction 1 28 - -
Apr7g1255 974 Coils Coil 560 587 - -
Apr7g1255 974 Gene3D Transferase(Phosphotransferase) domain 1 767 973 - -
Apr7g1255 974 Pfam Protein kinase domain 709 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1255 974 Gene3D Phosphorylase Kinase; domain 1 678 766 - -
Apr7g1255 974 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 300 965 - -
Apr7g1255 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Apr7g1255 974 ProSiteProfiles Protein kinase domain profile. 707 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1255 974 PANTHER DUAL SPECIFICITY PROTEIN KINASE 300 965 - -
Apr7g1255 974 MobiDBLite consensus disorder prediction 638 660 - -
Apr7g1255 974 MobiDBLite consensus disorder prediction 155 181 - -
Apr7g1255 974 MobiDBLite consensus disorder prediction 155 174 - -
Apr7g1255 974 SUPERFAMILY Protein kinase-like (PK-like) 694 953 IPR011009 -
Apr7g1255 974 SMART serkin_6 707 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1255 974 CDD STKc_PRP4 707 967 IPR044092 GO:0004674|GO:0006468|GO:0045292
Apr7g1255 974 MobiDBLite consensus disorder prediction 506 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1255 Apr-Chr7 19604670 19613209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1255 714 934 Core Cell Cycle Gene Families AT1G66750 32.035 2.09e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Apr7g1255 Pkinase 4.6e-39 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1255 7 19604670 19613209 Apr7g1255 7 19604670 19613209 ECH