Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1237 ATGGGGCTGCTCTATTTCTCAATCAATCAACATCTTTATACACCACCTCGTTCCAACTTAGCCAACGTGCCACGGTGGCGGCGGATGGATGCCATCGCAGCTTTCCATTGCCGGAAAGACAAGGTGGTCGTGATCATGGGGGCCACCGGCACTGGAAAATCGCGCCTCTCCGTCGACCTCGCTTCCCGCTTCCCCTTTTCTGAAATCATAAACTATGATAAAATGCAACTCTACAGTGGCCTCGACATCACCACTAACAAGATCCCCATCAGAGAGCAAAACGGCGTGCCTCACCACCTTCTCGACGAGTTTGACCCTTCCAATGACGAGTTCACGGCATCAGAGTTTCGCCAGCGTGCCAGCAAACTGGTCGCTGACATCTCATCCCGGAGGAAGCTCCCAATCCTTGTGGGAGGGTCGAACTCGTTCATTCACGCCCTTCTCGTGGAACGATTCGACCCTGTGTTGAATGTCTTTGATGACTCACGGCCAACAATCCCATCCGAGTTGACTGGGTTGAGGTACCAGTGCTGCTTTCTCTGGTTGGATGTTTCGTTGCCTGTGTTGACGGAATATTTGCTTAAGCGAGTGGATGACATGCTTGACTCGGGGATGGTGGACGAGTTGGCCGAGTTTTATAAATCGAGCGGTGACTCGACGAGTGAGAACGGGTTGAGGAAGGCAATTGGAGTGGTCGAGTTTGAGCGTTATTTTAAGGAATATCCTCCAACGTTGGAGATGGGAGGATTTTGTTTGGAGGATGGGGGCGGGGATGGCATGCGGAAAGGTGCATACGAGAGTGCTGTGAGGGCAATGAAGGACAACACGTGTCAATTGGCGAAAAGGCAGATAAGGAAGATTTTGCGGCTACAAAGGGTGGGGTGGGACCTGCAAAGAGTGGATGCCACGGCGGTGTTGAGGGGCGGAGGAAGGTGCTCGGAGATTTGGGAGAAGGATGTTTTGGAACCCAGTTACACGATTGTTAAGCATTTCTTGGAGGATGTTTAG 1008 0.5198 MGLLYFSINQHLYTPPRSNLANVPRWRRMDAIAAFHCRKDKVVVIMGATGTGKSRLSVDLASRFPFSEIINYDKMQLYSGLDITTNKIPIREQNGVPHHLLDEFDPSNDEFTASEFRQRASKLVADISSRRKLPILVGGSNSFIHALLVERFDPVLNVFDDSRPTIPSELTGLRYQCCFLWLDVSLPVLTEYLLKRVDDMLDSGMVDELAEFYKSSGDSTSENGLRKAIGVVEFERYFKEYPPTLEMGGFCLEDGGGDGMRKGAYESAVRAMKDNTCQLAKRQIRKILRLQRVGWDLQRVDATAVLRGGGRCSEIWEKDVLEPSYTIVKHFLEDV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1237 335 Pfam IPP transferase 76 151 - -
Apr7g1237 335 Pfam IPP transferase 169 285 - -
Apr7g1237 335 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 35 332 - -
Apr7g1237 335 Gene3D - 39 332 IPR027417 -
Apr7g1237 335 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 186 297 - -
Apr7g1237 335 ProSiteProfiles Guanylate kinase-like domain profile. 40 246 IPR008144 -
Apr7g1237 335 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 35 332 IPR039657 -
Apr7g1237 335 Hamap tRNA dimethylallyltransferase [miaA]. 42 307 IPR018022 GO:0008033
Apr7g1237 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 155 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1237 Apr-Chr7 19441258 19442265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1237 45 333 C2H2 Transcription Factor Family AT2G27760 32.713 2.99e-47 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1237 7 19441258 19442265 Apr7g1237 7 19441258 19442265 ECH