Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1224 ATGGGTTCGAAGATGGAAGGAGCTTCTTCTTCTTCTACCCCAGCAATTAGGCGTGACCCTTATGAGGTTTTGTCTGTTTCAAGAGACTCCACTGATCAGGAAATCAAAACTGCATACAGGAAGCTTGCTCTCAAGTATCACCCTGACAAGAATGCCAACAATCCCGAAGCTTCAGAACTATTCAAAGAGGTTGCATATTCGTATAATATTTTGTCTGATCCAGAGAAGAAAAGGCAGTACGATAGCGCAGGGTTTGAGGCATTAGATGCTGATGCCATGGACATGGAAATCGACTTATCTAATCTTGGAACTGTTAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACCATTTCAGCTAATGTTCTTGAAGAAGCTCTAAACGGAACAGTGACAGTTAGACCCCTTCCAATTGGAACATCTGTTAATGGAAAGGTAGAAAAACAATGCGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCTGAATCAGGGATTGTTATACGAGTTATTTCAACTGCACAAAGTAAATTCAAGTTGCTGTACTTTGAACAAGATGCGAATGGTGGTTATGGCTTGGCATTGCAGGAAGATAGCGAGAAGACTGGCAAGGTCATGTCTGCTGGAATGTATTTCTTACATTTTCAAGTTTACAGAATGGATTCAACTGTAAATGCGTTAGCAATGGCCAAGGATCCTGAAGCCGCCTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCGGAACTAAAGCCTGGCACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTTCCTATACAATTGAGGCAATTTGTGCAAAATCATATGAAGAAACCTCTCAAAAACTGAAGGATGTTGAGGCTCAGATTTTAAGAAAAAGGATCGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCACGTTATCAAGAAGTGACTGACCGATACACCCAAGAGAAGCAGTCTGTTGATGAACTTCTGAAAGAAAGAGACACCATCCATTCTTCTTTCACCATTATCAAGCCGGCAAATATTGGTGGGAGTGGTAGTAATTTAAGTAATGGTAGTAGTAGCAAAATTACTGGTGAAGATTCGAAAGTAGAGAGCTCTGGGGAAGATCTAGGTTCAGATGGAAAGGATAAATCGGGAAAAAAGAAATGGTTTAACATCAATCTTAAGGGTTCAGATAAAAGGTTGGTTTGA 1248 0.403 MGSKMEGASSSSTPAIRRDPYEVLSVSRDSTDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKKRQYDSAGFEALDADAMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVNGKVEKQCAHFFGVTINEQQAESGIVIRVISTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVMSAGMYFLHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAICAKSYEETSQKLKDVEAQILRKRIELRQFEAEYRKALARYQEVTDRYTQEKQSVDELLKERDTIHSSFTIIKPANIGGSGSNLSNGSSSKITGEDSKVESSGEDLGSDGKDKSGKKKWFNINLKGSDKRLV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1224 415 MobiDBLite consensus disorder prediction 363 400 - -
Apr7g1224 415 ProSiteProfiles dnaJ domain profile. 19 84 IPR001623 -
Apr7g1224 415 MobiDBLite consensus disorder prediction 1 16 - -
Apr7g1224 415 ProSitePatterns Nt-dnaJ domain signature. 61 80 IPR018253 -
Apr7g1224 415 SMART dnaj_3 18 76 IPR001623 -
Apr7g1224 415 MobiDBLite consensus disorder prediction 1 28 - -
Apr7g1224 415 MobiDBLite consensus disorder prediction 380 400 - -
Apr7g1224 415 Gene3D DnaJ domain 5 101 IPR036869 -
Apr7g1224 415 MobiDBLite consensus disorder prediction 363 379 - -
Apr7g1224 415 PRINTS DnaJ domain signature 21 39 IPR001623 -
Apr7g1224 415 PRINTS DnaJ domain signature 39 54 IPR001623 -
Apr7g1224 415 PRINTS DnaJ domain signature 56 76 IPR001623 -
Apr7g1224 415 PRINTS DnaJ domain signature 76 95 IPR001623 -
Apr7g1224 415 SUPERFAMILY Chaperone J-domain 18 90 IPR036869 -
Apr7g1224 415 CDD DnaJ 19 73 IPR001623 -
Apr7g1224 415 Pfam DnaJ domain 19 81 IPR001623 -
Apr7g1224 415 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 2 413 - -
Apr7g1224 415 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 2 413 - -
Apr7g1224 415 Coils Coil 289 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1224 Apr-Chr7 19333184 19348461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1224 10 91 C2H2 Transcription Factor Family AT1G74250 40.230 1.74e-12 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1224 7 19333184 19348461 Apr7g1224 7 19333184 19348461 ECH