Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1220 ATGAGTTGCAATGACCAAGCCTCTGGTGCTAGTCTCAACATTAGGGGCTTACTTTGCAACGCTGGTGCTGGTGCCGCTGCTGGGGCAATTGCTGCTACATTTGTGTGCCCGTTGGATGTGATCAAGACTAGGCTCCAAGTACATGGTCTTCCTCCTGCACAGAAAGGTAGTGTCATTGTCACGAGCTTGCAGAATATAGTAAGGAATGAAGGCTTCAGGGGAATGTACAGGGGCCTTTCACCAACAATATTGGCATTACTTCCAAACTGGGCAGTTTACTTCACAAGTTATGAGCAACTAAAGGGCCTGCTTCGTTCACGTGATGGTTGCAATGAACTCACAACTCTTGGCAATATTATAGCTGCTGCTGGGGCTGGGGCAGCAACAGCAATTTCTACAAATCCACTGTGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGCCTGATGTTGTTCCTTACAAGAGCGTTTTTTCTGCTTTGACAAGGATTACACATGAGGAAGGCATACGAGGCCTATATAGTGGCATTGTGCCTTCATTGGCTGGCGTAAGTCATGTTGCTATTCAATTTCCTGCATATGAAAAGATAAAGTCATACATGGCAGAGAAAGATAACACAACCGTTGACAAGCTAAGCCCTGGGAATGTTGCCATCGCATCATCAATTTCAAAAATAATTGCATCGGTAATGACTTATCCGCATGAGGTAATACGTTCCAGGCTGCAAGAGCAAGGCCAGGCCAAAAATATTGGGGTTCAATATGCAGGGGTTGTTGATTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCCAGGGTTTTATCGTGGTTGCGCAACCAATCTGTTAAGAACAACACCATCTGCTGTTATTACATTCACCAGTTATGAGATGATACACAGGTTTTTGGAGCGAGCTATACCTCAGGACAAGGGGTATCCTCAAGGCCCTAAATCGAATGAATTTAAGCCCCGGCCAGAAGCCAGTGAAATTGATGTGAAAAATGGCACTGGTAAGGGGCATCCACCGTCTCAGTCTAACATGAAATCTTCATCAATTCCTCTCGGAAACAAAGAGCAGCTAACAAGACATTGA 1098 0.449 MSCNDQASGASLNIRGLLCNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPAQKGSVIVTSLQNIVRNEGFRGMYRGLSPTILALLPNWAVYFTSYEQLKGLLRSRDGCNELTTLGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVFSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAEKDNTTVDKLSPGNVAIASSISKIIASVMTYPHEVIRSRLQEQGQAKNIGVQYAGVVDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLERAIPQDKGYPQGPKSNEFKPRPEASEIDVKNGTGKGHPPSQSNMKSSSIPLGNKEQLTRH* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1220 365 MobiDBLite consensus disorder prediction 340 365 - -
Apr7g1220 365 Gene3D Mitochondrial carrier domain 16 304 IPR023395 -
Apr7g1220 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Apr7g1220 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Apr7g1220 365 SUPERFAMILY Mitochondrial carrier 18 299 IPR023395 -
Apr7g1220 365 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 11 312 - -
Apr7g1220 365 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 312 IPR044712 GO:0006862|GO:0055085
Apr7g1220 365 MobiDBLite consensus disorder prediction 310 365 - -
Apr7g1220 365 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Apr7g1220 365 Pfam Mitochondrial carrier protein 20 105 IPR018108 -
Apr7g1220 365 Pfam Mitochondrial carrier protein 213 305 IPR018108 -
Apr7g1220 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Apr7g1220 365 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Apr7g1220 365 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Apr7g1220 365 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Apr7g1220 365 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Apr7g1220 365 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1220 Apr-Chr7 19267238 19273011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1220 33 359 Chloroplast and Mitochondria Gene Families AT1G25380 65.089 2.36e-149 424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1220 7 19267238 19273011 Apr7g1220 7 19267238 19273011 ECH